Institute of Cardiovascular Regeneration Webtool Repository

Region Summary

Source ID	Type	Tax ID	Position
ENSG00000157578-ENSG00000185437	CGP	9606	21:39405844-39515506
Gene	Transcript	Position	Biotype
ENSG00000157578 (LCA5L) Leber congenital amaurosis 5-like	ENST00000288350 (LCA5L-001)	39405844-39445777	protein_coding
	ENST00000358268 (LCA5L-002)	39405860-39445733	protein_coding
	ENST00000380671 (LCA5L-201)	39405844-39428522	protein_coding
	ENST00000411566 (LCA5L-013)	39428215-39445733	protein_coding
	ENST00000415863 (LCA5L-010)	39428285-39445769	protein_coding
	ENST00000418018 (LCA5L-019)	39423245-39445760	protein_coding
	ENST00000426783 (LCA5L-015)	39428305-39445769	protein_coding
	ENST00000434281 (LCA5L-018)	39428208-39445803	protein_coding
	ENST00000438404 (LCA5L-009)	39428210-39445719	protein_coding
	ENST00000448288 (LCA5L-014)	39428172-39445778	protein_coding
	ENST00000451131 (LCA5L-008)	39428462-39445752	protein_coding
	ENST00000456017 (LCA5L-017)	39428402-39445780	protein_coding
	ENST00000459939 (LCA5L-021)	39422988-39445761	processed_transcript
	ENST00000466954 (LCA5L-012)	39423420-39445733	processed_transcript
	ENST00000468009 (LCA5L-022)	39428222-39438936	processed_transcript
	ENST00000480612 (LCA5L-011)	39443459-39445753	retained_intron
	ENST00000484878 (LCA5L-016)	39411718-39445752	processed_transcript
	ENST00000485895 (LCA5L-006)	39421560-39445777	protein_coding
	ENST00000490184 (LCA5L-007)	39423240-39445775	processed_transcript
	ENST00000491625 (LCA5L-003)	39422412-39445805	retained_intron
	ENST00000495240 (LCA5L-020)	39405978-39411147	processed_transcript
ENSG00000182093 (WRB) tryptophan rich basic protein	ENST00000333781 (WRB-001)	39380244-39397889	protein_coding
	ENST00000380708 (WRB-004)	39387765-39397889	protein_coding
	ENST00000380713 (WRB-009)	39386093-39393280	protein_coding
	ENST00000398753 (WRB-002)	39380458-39397116	protein_coding
	ENST00000415847 (WRB-013)	39391778-39406446	protein_coding
	ENST00000442773 (WRB-003)	39380487-39390803	protein_coding
	ENST00000466787 (WRB-006)	39387791-39397254	nonsense_mediated_decay
	ENST00000471468 (WRB-008)	39380414-39391205	retained_intron
	ENST00000476914 (WRB-017)	39425871-39428528	processed_transcript
	ENST00000478273 (WRB-018)	39410869-39428528	protein_coding
	ENST00000480690 (WRB-016)	39425919-39428528	processed_transcript
	ENST00000487869 (WRB-005)	39380394-39392046	retained_intron
	ENST00000490860 (WRB-007)	39392896-39397104	retained_intron
	ENST00000623703 (WRB-019)	39380354-39414288	nonsense_mediated_decay
ENSG00000185437 (SH3BGR) SH3 domain binding glutamate-rich protein	ENST00000333634 (SH3BGR-001)	39451830-39515506	protein_coding
	ENST00000380631 (SH3BGR-006)	39445942-39515207	protein_coding
	ENST00000380634 (SH3BGR-007)	39445865-39515355	protein_coding
	ENST00000380637 (SH3BGR-002)	39445855-39515506	protein_coding
	ENST00000423596 (SH3BGR-010)	39462534-39511775	protein_coding
	ENST00000440288 (SH3BGR-005)	39445931-39511706	protein_coding
	ENST00000447939 (SH3BGR-009)	39499823-39515506	protein_coding
	ENST00000452550 (SH3BGR-008)	39452123-39515506	protein_coding
	ENST00000458295 (SH3BGR-004)	39445875-39515270	protein_coding
ENSG00000228349 (RPS26P4) ribosomal protein S26 pseudogene 4	ENST00000431743 (RPS26P4-001)	39491544-39491898	processed_pseudogene
ENSG00000235808 (MYL6P2) myosin, light chain 6 pseudogene 2	ENST00000450079 (MYL6P2-001)	39488327-39488760	processed_pseudogene

CIL_0004WM_0002 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSMUSG00000045275-ENSMUSG00000040666	CGP	10090	16:96158407-96228933
Gene	Transcript	Position	Biotype
ENSMUSG00000040666 (Sh3bgr) SH3-binding domain glutamic acid-rich protein	ENSMUST00000048770 (Sh3bgr-001)	96200470-96228933	protein_coding
	ENSMUST00000123728 (Sh3bgr-201)	96200671-96228928	protein_coding
	ENSMUST00000129904 (Sh3bgr-002)	96205719-96220591	protein_coding
	ENSMUST00000132424 (Sh3bgr-005)	96200729-96224591	protein_coding
	ENSMUST00000145069 (Sh3bgr-006)	96220499-96228925	protein_coding
	ENSMUST00000157060 (Sh3bgr-003)	96206643-96224563	protein_coding
	ENSMUST00000166952 (Sh3bgr-004)	96200704-96220591	protein_coding
	ENSMUST00000171181 (Sh3bgr-202)	96200671-96224560	protein_coding
ENSMUSG00000045275 (Lca5l) Leber congenital amaurosis 5-like	ENSMUST00000054855 (Lca5l-201)	96159068-96192257	protein_coding
	ENSMUST00000113804 (Lca5l-001)	96158407-96192250	protein_coding
	ENSMUST00000142620 (Lca5l-002)	96160499-96192250	retained_intron
	ENSMUST00000154445 (Lca5l-003)	96181433-96192257	processed_transcript

Expression Patterns

Heat Map

Heat Map (Expressed Only)

Numeric Values

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSG00000157578

ENST00000288350

N/A

0.303±0.00

N/A

ENST00000358268

N/A

ENST00000380671

N/A

24.415±0.00

N/A

N/A

N/A

N/A

N/A

0.864±0.00

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

N/A

0.764±0.00

N/A

ENST00000485895

N/A

0.192±0.00

N/A

ENST00000490184

N/A

ENST00000491625

N/A

ENST00000495240

N/A

85.740±53.03

ENSG00000182093

ENST00000333781

6.095±0.00

9.347±0.00

0.843±0.00

18.741±10.02

4.467±3.38

9.966±0.00

2.915±2.23

8.793±7.60

3.749±2.23

6.138±3.85

4.798±0.00

8.582±5.47

3.809±0.65

30.954±0.00

ENST00000380708

N/A

3.920±0.00

N/A

1.338±0.00

0.849±0.38

1.135±0.00

N/A

4.766±3.38

1.753±0.84

N/A

ENST00000380713

N/A

1.820±0.00

N/A

ENST00000398753

N/A

12.758±8.53

N/A

5.221±0.00

2.952±0.00

N/A

6.146±0.00

10.309±0.00

5.607±1.80

N/A

ENST00000415847

N/A

ENST00000442773

N/A

ENST00000466787

N/A

0.820±0.00

N/A

N/A

N/A

N/A

N/A

N/A

12.672±0.00

12.226±0.00

N/A

ENST00000490860

N/A

1.785±0.00

N/A

ENST00000623703

N/A

0.192±0.00

N/A

ENSG00000185437

ENST00000333634

N/A

0.375±0.00

N/A

1.589±1.37

4.058±0.00

5.345±4.53

10.597±6.84

1.216±0.00

1.864±1.73

0.336±0.21

18.350±4.40

0.835±0.42

0.603±0.19

2.699±0.00

ENST00000380631

N/A

0.296±0.00

1.964±1.66

N/A

0.266±0.00

8.000±0.00

N/A

0.494±0.00

N/A

0.841±0.38

0.343±0.00

1.451±0.00

ENST00000380634

0.275±0.00

1.385±0.00

N/A

3.234±2.74

6.666±0.00

12.580±0.00

10.874±0.00

1.658±0.56

0.340±0.00

1.740±0.00

36.522±0.00

N/A

0.369±0.11

3.051±1.43

ENST00000380637

N/A

2.418±2.12

0.296±0.00

N/A

0.773±0.00

N/A

0.651±0.46

N/A

2.461±0.22

ENST00000423596

1.078±0.00

4.461±0.00

N/A

12.716±0.00

N/A

ENST00000440288

0.369±0.00

N/A

1.789±0.00

N/A

1.309±0.02

1.260±0.60

11.576±0.00

ENST00000447939

0.268±0.00

N/A

1.441±0.00

0.724±0.00

N/A

16.270±0.00

N/A

0.574±0.00

3.542±0.00

ENST00000452550

N/A

0.830±0.00

N/A

ENST00000458295

N/A

3.133±0.00

ENSG00000228349

ENST00000431743

N/A

0.070±0.00

N/A

0.035±0.00

2.338±0.00

N/A

ENSG00000235808

ENST00000450079

0.379±0.00

0.268±0.00

N/A

0.100±0.00

0.048±0.00

0.639±0.00

0.461±0.42

0.372±0.00

N/A

0.047±0.00

0.193±0.00

0.082±0.00

N/A

0.372±0.01

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSMUSG00000040666

ENSMUST00000048770

1.376±1.26

0.556±0.13

71.397±7.34

0.153±0.07

6.549±5.39

1.037±0.30

34.850±1.18

0.518±0.54

0.204±0.18

0.750±0.12

318.452±13.97

2.212±0.87

1.334±2.02

0.420±0.19

ENSMUST00000123728

N/A

5.480±0.00

N/A

0.070±0.04

N/A

3.678±3.01

0.321±0.14

0.308±0.00

ENSMUST00000129904

N/A

0.450±0.00

N/A

0.235±0.00

N/A

0.036±0.00

N/A

0.626±0.00

ENSMUST00000132424

N/A

ENSMUST00000145069

7.535±4.41

1.808±0.56

N/A

0.318±0.14

26.373±15.24

6.678±1.59

87.210±9.04

1.783±0.41

0.168±0.06

3.884±1.54

N/A

7.485±4.02

0.443±0.32

0.481±0.24

ENSMUST00000157060

N/A

1.144±0.00

N/A

10.724±0.00

0.889±0.29

N/A

ENSMUST00000166952

N/A

0.600±0.00

N/A

0.219±0.00

N/A

0.744±0.00

N/A

ENSMUST00000171181

N/A

0.366±0.00

N/A

19.423±3.95

0.445±0.18

0.352±0.00

ENSMUSG00000045275

ENSMUST00000054855

N/A

0.447±0.13

N/A

0.226±0.00

0.132±0.03

N/A

0.053±0.01

N/A

0.222±0.01

N/A

0.924±0.36

0.079±0.00

21.505±22.35

ENSMUST00000113804

0.256±0.12

0.428±0.19

0.318±0.07

0.502±0.25

0.168±0.10

0.150±0.05

0.107±0.04

0.068±0.04

0.017±0.00

0.283±0.12

0.257±0.04

0.937±0.66

0.194±0.13

20.149±14.91

ENSMUST00000142620

N/A

0.128±0.00

0.073±0.00

0.075±0.02

N/A

0.023±0.00

3.456±0.18

ENSMUST00000154445

N/A

0.369±0.04

0.501±0.00

0.850±0.15

0.158±0.06

0.091±0.03

0.085±0.04

0.126±0.00

0.038±0.02

0.222±0.00

0.070±0.02

0.978±0.19

0.089±0.05

N/A

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

Expression Patterns

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