C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calmodulin binding transcription activator 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040712 Camta2 10090 - 11:70669463-70688105 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036299 Camta2-004 70669463-70687953 protein_coding
  ENSMUST00000100933 Camta2-006 70669463-70687972 protein_coding
  ENSMUST00000108544 Camta2-005 70669463-70688105 protein_coding
  ENSMUST00000108545 Camta2-008 70669463-70687943 protein_coding
  ENSMUST00000119120 Camta2-007 70669464-70687955 protein_coding
  ENSMUST00000120261 Camta2-009 70669463-70687943 protein_coding
  ENSMUST00000125687 Camta2-001 70669466-70683776 retained_intron
  ENSMUST00000145823 Camta2-003 70669463-70686389 nonsense_mediated_decay
  ENSMUST00000150224 Camta2-002 70685914-70687948 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036299ENSMUST00000100933ENSMUST00000108544ENSMUST00000108545ENSMUST00000119120ENSMUST00000120261ENSMUST00000125687ENSMUST00000145823
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036299 N/A 4.098±0.00 N/A 0.953±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000100933 N/A N/A N/A 12.071±0.00 N/A N/A N/A N/A 0.511±0.10 N/A 2.168±0.00 4.520±1.51 3.471±0.00 0.139±0.00
ENSMUST00000108544 N/A 2.884±0.26 N/A 5.151±2.66 1.744±0.16 4.162±0.19 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108545 2.375±0.00 5.068±2.55 2.098±0.00 N/A 5.106±1.64 N/A N/A N/A 1.008±0.79 3.023±0.05 3.512±0.76 2.422±0.30 1.857±1.28 1.140±0.46
ENSMUST00000119120 7.758±0.76 8.316±4.72 6.074±1.31 1.136±0.00 4.470±2.54 14.008±3.23 7.235±1.65 5.227±1.20 2.205±1.08 6.937±0.65 9.859±1.37 5.300±1.21 6.176±3.78 2.238±0.27
ENSMUST00000120261 N/A 2.111±0.00 N/A 12.030±13.85 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125687 3.771±0.66 4.467±0.96 2.873±1.09 2.250±0.65 4.623±1.13 9.174±2.14 2.427±0.61 2.149±0.32 1.272±0.49 4.406±0.79 N/A 3.666±1.20 2.179±1.40 0.934±0.59
ENSMUST00000145823 N/A 2.037±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.972±0.13 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WD CIL_0004WD_0002 CGP 11:70663771-70688105
CIL_00006G CIL_00006G_0002 CGP 11:70669463-70700155

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0008134 IEA transcription factor binding
GO:0014898 IEA cardiac muscle hypertrophy in response to stress
GO:0042826 IEA histone deacetylase binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054200 CAMTA2 calmodulin binding transcription activator 2 protein_coding Danio_rerio
ENSG00000108509 CAMTA2 calmodulin binding transcription activator 2 protein_coding Homo_sapiens

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