C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calmodulin binding transcription activator 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108545 Camta2-008 ENSMUSG00000040712 10090 - 11:70669463-70687943 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastLiverLungMuscleOvaryPlacentaTestisENSMUST00000108545
Transcript ID Adipose Adrenal Bladder Breast Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108545 2.375±0.00 5.068±2.55 2.098±0.00 5.106±1.64 1.008±0.79 3.023±0.05 3.512±0.76 2.422±0.30 1.857±1.28 1.140±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WD CIL_0004WD_0002 CGP 11:70663771-70688105
CIL_00006G CIL_00006G_0002 CGP 11:70669463-70700155

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303635 CAMTA1-001 protein_coding Homo_sapiens 2e-37 163
ENST00000348066 CAMTA2-001 protein_coding Homo_sapiens 0 4272
ENST00000361571 CAMTA2-002 protein_coding Homo_sapiens 0 4878
ENST00000381311 CAMTA2-004 protein_coding Homo_sapiens 0 4370
ENST00000414043 CAMTA2-003 protein_coding Homo_sapiens 0 4266
ENST00000571831 CAMTA2-009 processed_transcript Homo_sapiens 0 329
ENST00000572192 CAMTA2-014 retained_intron Homo_sapiens 0 673
ENST00000572326 CAMTA2-016 processed_transcript Homo_sapiens 0 429
ENST00000572543 CAMTA2-007 protein_coding Homo_sapiens 0 4274
ENST00000573004 CAMTA2-005 nonsense_mediated_decay Homo_sapiens 0 632
ENST00000574442 CAMTA2-013 retained_intron Homo_sapiens 0 684
ENST00000574606 CAMTA2-010 protein_coding Homo_sapiens 0 488
ENST00000574951 CAMTA2-006 nonsense_mediated_decay Homo_sapiens 0 4373
ENST00000575192 CAMTA2-012 retained_intron Homo_sapiens 0 331
ENST00000575365 CAMTA2-011 processed_transcript Homo_sapiens 0 265
ENST00000575580 CAMTA2-008 retained_intron Homo_sapiens 0 259
ENST00000576872 CAMTA2-015 retained_intron Homo_sapiens 0 845

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