C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004WD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000091640-ENSG00000108509 CGP 9606 17:4959226-4987652
GeneTranscriptPositionBiotype
ENSG00000091640 (SPAG7)
sperm associated antigen 7 		ENST00000206020 (SPAG7-001) 4959228-4967872 protein_coding
ENST00000570341 (SPAG7-005) 4966238-4966749 processed_transcript
ENST00000571023 (SPAG7-004) 4965830-4967808 processed_transcript
ENST00000572148 (SPAG7-007) 4959984-4960621 retained_intron
ENST00000573366 (SPAG7-003) 4959256-4967191 protein_coding
ENST00000573805 (SPAG7-006) 4960187-4967785 retained_intron
ENST00000575142 (SPAG7-002) 4959226-4967790 protein_coding
ENST00000575784 (SPAG7-008) 4959503-4967789 nonsense_mediated_decay
ENSG00000108509 (CAMTA2)
calmodulin binding transcription activator 2 		ENST00000348066 (CAMTA2-001) 4967998-4987652 protein_coding
ENST00000361571 (CAMTA2-002) 4967997-4987370 protein_coding
ENST00000381311 (CAMTA2-004) 4967997-4987650 protein_coding
ENST00000414043 (CAMTA2-003) 4967997-4987112 protein_coding
ENST00000571831 (CAMTA2-009) 4981719-4983760 processed_transcript
ENST00000572192 (CAMTA2-014) 4968139-4969081 retained_intron
ENST00000572326 (CAMTA2-016) 4972951-4978569 processed_transcript
ENST00000572543 (CAMTA2-007) 4967997-4987641 protein_coding
ENST00000573004 (CAMTA2-005) 4980436-4987632 nonsense_mediated_decay
ENST00000574442 (CAMTA2-013) 4968397-4969415 retained_intron
ENST00000574606 (CAMTA2-010) 4980618-4986213 protein_coding
ENST00000574951 (CAMTA2-006) 4967992-4986234 nonsense_mediated_decay
ENST00000575192 (CAMTA2-012) 4974048-4977200 retained_intron
ENST00000575365 (CAMTA2-011) 4977143-4979442 processed_transcript
ENST00000575580 (CAMTA2-008) 4982802-4983236 retained_intron
ENST00000576872 (CAMTA2-015) 4969428-4972793 retained_intron
ENSG00000262429 (RP5-1050D4.3)
 ENST00000576752 (RP5-1050D4.3-001) 4967995-4968822 antisense
ENSG00000274300 (MIR6864)
microRNA 6864 		ENST00000617935 (MIR6864-201) 4969702-4969771 miRNA
ENSG00000278517 (MIR6865)
microRNA 6865 		ENST00000614295 (MIR6865-201) 4970086-4970150 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0004WD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018287-ENSMUSG00000040712 CGP 10090 11:70663771-70688105
GeneTranscriptPositionBiotype
ENSMUSG00000018287 (Spag7)
sperm associated antigen 7 		ENSMUST00000018431 (Spag7-001) 70663771-70669416 protein_coding
ENSMUST00000124691 (Spag7-003) 70664340-70669279 retained_intron
ENSMUST00000129434 (Spag7-002) 70664399-70669290 protein_coding
ENSMUST00000137691 (Spag7-004) 70664003-70669218 retained_intron
ENSMUSG00000040712 (Camta2)
calmodulin binding transcription activator 2 		ENSMUST00000036299 (Camta2-004) 70669463-70687953 protein_coding
ENSMUST00000100933 (Camta2-006) 70669463-70687972 protein_coding
ENSMUST00000108544 (Camta2-005) 70669463-70688105 protein_coding
ENSMUST00000108545 (Camta2-008) 70669463-70687943 protein_coding
ENSMUST00000119120 (Camta2-007) 70669464-70687955 protein_coding
ENSMUST00000120261 (Camta2-009) 70669463-70687943 protein_coding
ENSMUST00000125687 (Camta2-001) 70669466-70683776 retained_intron
ENSMUST00000145823 (Camta2-003) 70669463-70686389 nonsense_mediated_decay
ENSMUST00000150224 (Camta2-002) 70685914-70687948 retained_intron

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004WD_0001ENSG00000091640ENST00000206020ENST00000570341ENST00000571023ENST00000572148ENST00000573366ENST00000573805ENST00000575142ENST00000575784ENSG00000108509ENST00000348066ENST00000361571ENST00000381311ENST00000414043ENST00000571831ENST00000572192ENST00000572326ENST00000572543ENST00000573004ENST00000574442ENST00000574606ENST00000574951ENST00000575192ENST00000575365ENST00000575580ENST00000576872ENSG00000262429ENST00000576752ENSG00000274300ENST00000617935ENSG00000278517ENST00000614295CIL_0004WD_0002ENSMUSG00000018287ENSMUST00000018431ENSMUST00000124691ENSMUST00000129434ENSMUST00000137691ENSMUSG00000040712ENSMUST00000036299ENSMUST00000100933ENSMUST00000108544ENSMUST00000108545ENSMUST00000119120ENSMUST00000120261ENSMUST00000125687ENSMUST00000145823ENSMUST00000150224
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004WD_0001ENSG00000091640ENST00000206020ENST00000570341ENST00000575142ENST00000575784ENSG00000108509ENST00000348066ENST00000381311ENST00000572192ENST00000572543ENST00000573004ENST00000574442ENST00000574606ENST00000574951ENST00000576872ENSG00000262429ENST00000576752ENSG00000274300ENST00000617935ENSG00000278517ENST00000614295CIL_0004WD_0002ENSMUSG00000018287ENSMUST00000018431ENSMUST00000124691ENSMUST00000129434ENSMUST00000137691ENSMUSG00000040712ENSMUST00000036299ENSMUST00000100933ENSMUST00000108544ENSMUST00000108545ENSMUST00000119120ENSMUST00000120261ENSMUST00000125687ENSMUST00000145823
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000091640 ENST00000206020 8.791±0.00 N/A 4.803±0.00 16.823±6.79 6.777±4.90 10.591±7.07 26.861±16.13 18.541±9.81 14.583±9.96 16.667±12.65 38.936±7.64 21.725±11.26 51.467±6.72 32.104±0.98
ENST00000570341 N/A N/A N/A N/A 1.416±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575142 N/A N/A 1.981±0.00 N/A N/A 5.071±0.00 N/A N/A 0.795±0.00 N/A N/A 7.530±0.00 N/A N/A
ENST00000575784 N/A N/A N/A N/A 11.783±0.00 N/A N/A 9.951±0.00 N/A N/A N/A 1.279±0.00 N/A N/A
ENSG00000108509 ENST00000348066 N/A N/A N/A 16.491±0.00 0.249±0.00 2.619±0.00 N/A 2.044±0.00 2.162±0.00 0.263±0.00 11.293±0.00 4.455±0.00 3.254±0.18 N/A
ENST00000361571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000381311 N/A 8.448±0.00 N/A N/A N/A 0.748±0.00 N/A 8.740±0.00 3.981±0.00 8.045±0.00 9.687±0.00 5.557±1.50 4.225±0.84 11.570±1.89
ENST00000414043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572192 N/A N/A N/A N/A N/A N/A N/A N/A 1.542±0.00 N/A N/A N/A N/A N/A
ENST00000572326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572543 2.442±0.00 N/A N/A 0.805±0.00 N/A N/A 1.984±0.00 N/A 0.564±0.00 N/A N/A 1.296±1.00 N/A N/A
ENST00000573004 N/A N/A N/A 3.742±0.00 N/A N/A 0.761±0.00 N/A N/A 1.525±0.00 N/A N/A N/A N/A
ENST00000574442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.618±0.00 24.920±0.00 62.061±0.00
ENST00000574606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.936±0.00 N/A N/A
ENST00000574951 N/A N/A N/A N/A N/A 3.439±0.00 0.901±0.66 N/A N/A N/A 12.965±0.00 1.980±1.77 N/A 3.317±0.00
ENST00000575192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576872 N/A N/A N/A N/A N/A 1.603±0.00 N/A N/A 1.058±0.00 N/A N/A N/A N/A N/A
ENSG00000262429 ENST00000576752 28.330±0.00 N/A N/A 63.337±0.00 N/A 30.367±0.00 N/A 24.705±0.00 N/A N/A N/A N/A N/A 35.635±0.00
ENSG00000274300 ENST00000617935 N/A N/A N/A N/A 0.830±0.00 N/A N/A 0.819±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000278517 ENST00000614295 N/A 2.032±0.00 N/A 1.442±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018287 ENSMUST00000018431 23.589±2.14 10.074±1.45 51.073±6.44 40.729±9.41 14.543±5.29 12.408±2.37 36.722±3.38 26.602±4.20 29.142±17.32 21.538±0.38 48.200±3.40 30.517±14.58 61.752±14.72 29.746±7.34
ENSMUST00000124691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.508±0.00 N/A N/A
ENSMUST00000129434 N/A N/A N/A N/A 7.697±0.00 N/A N/A N/A N/A N/A N/A N/A 32.340±10.31 N/A
ENSMUST00000137691 N/A 2.541±0.21 N/A 16.880±0.00 2.635±0.28 2.347±0.62 N/A N/A N/A N/A N/A 11.052±6.85 51.050±37.64 N/A
ENSMUSG00000040712 ENSMUST00000036299 N/A 4.098±0.00 N/A 0.953±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000100933 N/A N/A N/A 12.071±0.00 N/A N/A N/A N/A 0.511±0.10 N/A 2.168±0.00 4.520±1.51 3.471±0.00 0.139±0.00
ENSMUST00000108544 N/A 2.884±0.26 N/A 5.151±2.66 1.744±0.16 4.162±0.19 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108545 2.375±0.00 5.068±2.55 2.098±0.00 N/A 5.106±1.64 N/A N/A N/A 1.008±0.79 3.023±0.05 3.512±0.76 2.422±0.30 1.857±1.28 1.140±0.46
ENSMUST00000119120 7.758±0.76 8.316±4.72 6.074±1.31 1.136±0.00 4.470±2.54 14.008±3.23 7.235±1.65 5.227±1.20 2.205±1.08 6.937±0.65 9.859±1.37 5.300±1.21 6.176±3.78 2.238±0.27
ENSMUST00000120261 N/A 2.111±0.00 N/A 12.030±13.85 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125687 3.771±0.66 4.467±0.96 2.873±1.09 2.250±0.65 4.623±1.13 9.174±2.14 2.427±0.61 2.149±0.32 1.272±0.49 4.406±0.79 N/A 3.666±1.20 2.179±1.40 0.934±0.59
ENSMUST00000145823 N/A 2.037±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.972±0.13 N/A
ENSMUST00000150224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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