C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 167
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040746 Rnf167 10090 + 11:70647235-70651421 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037534 Rnf167-001 70647287-70651421 protein_coding
  ENSMUST00000131071 Rnf167-006 70647569-70648254 retained_intron
  ENSMUST00000141237 Rnf167-010 70647943-70650334 retained_intron
  ENSMUST00000141537 Rnf167-004 70647235-70648106 processed_transcript
  ENSMUST00000141695 Rnf167-007 70647287-70651412 nonsense_mediated_decay
  ENSMUST00000143313 Rnf167-008 70649122-70649532 retained_intron
  ENSMUST00000151034 Rnf167-005 70648075-70651091 retained_intron
  ENSMUST00000152160 Rnf167-003 70647555-70649765 nonsense_mediated_decay
  ENSMUST00000152276 Rnf167-002 70647561-70651410 retained_intron
  ENSMUST00000152458 Rnf167-009 70649936-70650334 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037534ENSMUST00000151034ENSMUST00000152276ENSMUST00000152458
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037534 38.966±1.55 26.056±0.94 46.609±2.32 28.481±10.59 47.646±7.22 40.540±7.45 49.386±2.39 33.099±7.81 58.235±2.74 19.217±1.08 26.060±7.75 40.297±17.87 29.735±12.00
ENSMUST00000151034 N/A N/A N/A 27.427±0.00 N/A N/A N/A N/A N/A N/A 23.430±0.00 17.260±0.00 7.329±0.00
ENSMUST00000152276 N/A 25.247±2.64 N/A N/A 17.369±0.00 15.086±1.21 N/A 10.506±0.79 N/A N/A 18.188±4.34 N/A N/A
ENSMUST00000152458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 386.130±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WE CIL_0004WE_0002 CGP 11:70639122-70647479
CIL_00009G CIL_00009G_0002 CGP 11:70644196-70651421
CIL_0000C6 CIL_0000C6_0002 CGP 11:70647235-70654644

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000209 IEA protein polyubiquitination
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016874 IEA ligase activity
GO:0045786 IEA negative regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017636 rnf167 ring finger protein 167 protein_coding Danio_rerio
ENSG00000108523 RNF167 ring finger protein 167 protein_coding Homo_sapiens

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