C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 167
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037534 Rnf167-001 ENSMUSG00000040746 10090 + 11:70647287-70651421 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037534
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037534 38.966±1.55 26.056±0.94 46.609±2.32 28.481±10.59 47.646±7.22 40.540±7.45 49.386±2.39 33.099±7.81 58.235±2.74 19.217±1.08 26.060±7.75 40.297±17.87 29.735±12.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WE CIL_0004WE_0002 CGP 11:70639122-70647479
CIL_00009G CIL_00009G_0002 CGP 11:70644196-70651421
CIL_0000C6 CIL_0000C6_0002 CGP 11:70647235-70654644

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 IEA protein polyubiquitination
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016874 IEA ligase activity
GO:0045786 IEA negative regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262482 RNF167-001 protein_coding Homo_sapiens 0 1554
ENST00000570328 RNF167-010 protein_coding Homo_sapiens 0 340
ENST00000570492 RNF167-011 processed_transcript Homo_sapiens 0 813
ENST00000571816 RNF167-003 protein_coding Homo_sapiens 0 1343
ENST00000572382 RNF167-016 protein_coding Homo_sapiens 0 579
ENST00000572430 RNF167-004 protein_coding Homo_sapiens 0 1343
ENST00000572554 RNF167-006 retained_intron Homo_sapiens 0 560
ENST00000573404 RNF167-008 protein_coding Homo_sapiens 0 512
ENST00000574548 RNF167-015 retained_intron Homo_sapiens 0 322
ENST00000575111 RNF167-002 protein_coding Homo_sapiens 0 1572
ENST00000575400 RNF167-012 nonsense_mediated_decay Homo_sapiens 0 440
ENST00000575524 RNF167-014 retained_intron Homo_sapiens 0 357
ENST00000576229 RNF167-005 protein_coding Homo_sapiens 0 1308
ENST00000576452 RNF167-009 protein_coding Homo_sapiens 0 405

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