C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 167
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152276 Rnf167-002 ENSMUSG00000040746 10090 + 11:70647561-70651410 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverOvaryENSMUST00000152276
Transcript ID Adrenal Breast Colon Liver Ovary
ENSMUST00000152276 25.247±2.64 17.369±0.00 15.086±1.21 10.506±0.79 18.188±4.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WE CIL_0004WE_0002 CGP 11:70639122-70647479
CIL_00009G CIL_00009G_0002 CGP 11:70644196-70651421
CIL_0000C6 CIL_0000C6_0002 CGP 11:70647235-70654644

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262482 RNF167-001 protein_coding Homo_sapiens 0 813
ENST00000570328 RNF167-010 protein_coding Homo_sapiens 0 340
ENST00000570492 RNF167-011 processed_transcript Homo_sapiens 0 813
ENST00000571816 RNF167-003 protein_coding Homo_sapiens 0 649
ENST00000572382 RNF167-016 protein_coding Homo_sapiens 0 243
ENST00000572430 RNF167-004 protein_coding Homo_sapiens 0 649
ENST00000572554 RNF167-006 retained_intron Homo_sapiens 0 573
ENST00000573404 RNF167-008 protein_coding Homo_sapiens 0 512
ENST00000574548 RNF167-015 retained_intron Homo_sapiens 0 322
ENST00000575111 RNF167-002 protein_coding Homo_sapiens 0 813
ENST00000575400 RNF167-012 nonsense_mediated_decay Homo_sapiens 0 440
ENST00000575524 RNF167-014 retained_intron Homo_sapiens 0 427
ENST00000576229 RNF167-005 protein_coding Homo_sapiens 0 614
ENST00000576452 RNF167-009 protein_coding Homo_sapiens 0 405

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