C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: seven in absentia 1B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040749 Siah1b 10090 - X:164070705-164076493 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037928 Siah1b-001 164070705-164076121 protein_coding
  ENSMUST00000071667 Siah1b-002 164070705-164076150 protein_coding
  ENSMUST00000134272 Siah1b-003 164071885-164076493 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037928ENSMUST00000071667ENSMUST00000134272
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037928 N/A N/A N/A 0.984±0.00 N/A N/A N/A N/A 1.783±0.83 N/A N/A 2.417±1.36 1.240±0.68 0.811±0.34
ENSMUST00000071667 1.728±0.00 2.684±0.79 0.387±0.00 4.860±1.76 2.343±0.24 2.392±0.66 1.283±0.24 1.116±0.65 3.835±3.24 1.260±0.47 0.316±0.20 4.181±2.20 3.684±1.80 1.561±0.37
ENSMUST00000134272 1.046±0.18 3.619±1.62 N/A 2.876±1.47 0.960±0.10 1.823±0.16 N/A 1.002±0.25 1.151±0.84 1.563±0.35 0.333±0.00 4.280±1.29 2.090±0.69 0.874±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 TAS ubiquitin-protein transferase activity
GO:0005634 IEA nucleus
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0007275 IEA multicellular organismal development
GO:0008270 IEA zinc ion binding
GO:0016567 IEA:TAS protein ubiquitination
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030871 siah1 seven in absentia homolog 1 (Drosophila) protein_coding Danio_rerio
ENSG00000196470 SIAH1 siah E3 ubiquitin protein ligase 1 protein_coding Homo_sapiens

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