C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: seven in absentia 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071667 Siah1b-002 ENSMUSG00000040749 10090 - X:164070705-164076150 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071667
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071667 1.728±0.00 2.684±0.79 0.387±0.00 4.860±1.76 2.343±0.24 2.392±0.66 1.283±0.24 1.116±0.65 3.835±3.24 1.260±0.47 0.316±0.20 4.181±2.20 3.684±1.80 1.561±0.37

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 TAS ubiquitin-protein transferase activity
GO:0005634 IEA nucleus
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0007275 IEA multicellular organismal development
GO:0008270 IEA zinc ion binding
GO:0016567 IEA:TAS protein ubiquitination
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356721 SIAH1-001 protein_coding Homo_sapiens 0 1581
ENST00000380006 SIAH1-003 protein_coding Homo_sapiens 0 1583
ENST00000394725 SIAH1-002 protein_coding Homo_sapiens 0 1596
ENST00000479411 SIAH1P1-001 processed_pseudogene Homo_sapiens 0 649
ENST00000563745 SIAH1-006 protein_coding Homo_sapiens 0 422
ENST00000564259 LONP2-008 processed_transcript Homo_sapiens 0 472
ENST00000565185 LONP2-010 retained_intron Homo_sapiens 0 375
ENST00000565620 SIAH1-007 processed_transcript Homo_sapiens 0 429
ENST00000565867 LONP2-007 protein_coding Homo_sapiens 0 992
ENST00000566719 LONP2-009 retained_intron Homo_sapiens 0 1275
ENST00000568007 SIAH1-004 nonsense_mediated_decay Homo_sapiens 0 1266

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