C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: seven in absentia 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134272 Siah1b-003 ENSMUSG00000040749 10090 - X:164071885-164076493 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000134272
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000134272 1.046±0.18 3.619±1.62 2.876±1.47 0.960±0.10 1.823±0.16 1.002±0.25 1.151±0.84 1.563±0.35 0.333±0.00 4.280±1.29 2.090±0.69 0.874±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 TAS ubiquitin-protein transferase activity
GO:0005634 IEA nucleus
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0007275 IEA multicellular organismal development
GO:0016567 TAS protein ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356721 SIAH1-001 protein_coding Homo_sapiens 0 291
ENST00000380006 SIAH1-003 protein_coding Homo_sapiens 0 292
ENST00000394725 SIAH1-002 protein_coding Homo_sapiens 0 305
ENST00000563745 SIAH1-006 protein_coding Homo_sapiens 0 291
ENST00000565867 LONP2-007 protein_coding Homo_sapiens 0 292
ENST00000566719 LONP2-009 retained_intron Homo_sapiens 0 292
ENST00000568007 SIAH1-004 nonsense_mediated_decay Homo_sapiens 0 291

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