C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, MYND-type containing 15
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040829 Zmynd15 10090 + 11:70459433-70466202 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039093 Zmynd15-001 70459622-70466202 protein_coding
  ENSMUST00000092958 Zmynd15-002 70460565-70466090 protein_coding
  ENSMUST00000108563 Zmynd15-005 70459433-70466202 protein_coding
  ENSMUST00000126105 Zmynd15-004 70460137-70460896 protein_coding
  ENSMUST00000136029 Zmynd15-006 70460196-70466199 retained_intron
  ENSMUST00000147289 Zmynd15-003 70459940-70460862 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039093ENSMUST00000108563ENSMUST00000136029
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.115±0.00 N/A N/A 70.618±28.76
ENSMUST00000108563 4.027±1.80 2.970±0.56 1.651±0.00 0.213±0.08 7.815±2.31 3.760±0.08 N/A 6.552±0.66 1.019±0.46 9.045±1.92 0.238±0.20 4.455±1.20 0.533±0.37 N/A
ENSMUST00000136029 2.031±0.73 1.024±0.00 1.095±0.00 0.729±0.12 4.322±0.37 N/A 0.948±0.02 N/A 0.305±0.22 N/A 0.076±0.03 1.740±0.43 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RD CIL_0001RD_0002 CGP 11:70451919-70459984
CIL_0001RE CIL_0001RE_0002 CGP 11:70453983-70466202
CIL_0001RB CIL_0001RB_0002 CGP 11:70459433-70511178

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007286 IMP spermatid development
GO:0042826 IDA histone deacetylase binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000141497 ZMYND15 zinc finger, MYND-type containing 15 protein_coding Homo_sapiens

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