C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, MYND-type containing 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108563 Zmynd15-005 ENSMUSG00000040829 10090 + 11:70459433-70466202 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000108563
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000108563 4.027±1.80 2.970±0.56 1.651±0.00 0.213±0.08 7.815±2.31 3.760±0.08 6.552±0.66 1.019±0.46 9.045±1.92 0.238±0.20 4.455±1.20 0.533±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RD CIL_0001RD_0002 CGP 11:70451919-70459984
CIL_0001RE CIL_0001RE_0002 CGP 11:70453983-70466202
CIL_0001RB CIL_0001RB_0002 CGP 11:70459433-70511178

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007286 IMP spermatid development
GO:0042826 IDA histone deacetylase binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269289 ZMYND15-201 protein_coding Homo_sapiens 0 1648
ENST00000433935 ZMYND15-002 protein_coding Homo_sapiens 0 1775
ENST00000571782 ZMYND15-005 retained_intron Homo_sapiens 0 451
ENST00000573751 ZMYND15-004 protein_coding Homo_sapiens 0 1648
ENST00000574829 ZMYND15-003 retained_intron Homo_sapiens 0 846
ENST00000592813 ZMYND15-001 protein_coding Homo_sapiens 0 846

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