C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: brain-enriched guanylate kinase-associated
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190647 Begain-001 ENSMUSG00000040867 10090 - 12:109032187-109068217 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000190647
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000190647 1.498±0.76 1.202±0.61 0.292±0.15 26.492±15.98 1.986±1.00 0.629±0.13 0.062±0.01 0.113±0.03 0.323±0.31 1.425±0.17 0.072±0.04 1.652±0.65 0.350±0.19 0.762±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AA CIL_0004AA_0002 CGP 12:108894272-109068217
CIL_0004A9 CIL_0004A9_0002 CGP 12:109032187-109463336

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355173 BEGAIN-001 protein_coding Homo_sapiens 0 1886
ENST00000443071 BEGAIN-201 protein_coding Homo_sapiens 0 1888
ENST00000553553 BEGAIN-005 protein_coding Homo_sapiens 0 1127
ENST00000554140 BEGAIN-006 protein_coding Homo_sapiens 0 719
ENST00000554356 BEGAIN-008 protein_coding Homo_sapiens 0 929
ENST00000554747 BEGAIN-004 processed_transcript Homo_sapiens 0 244
ENST00000556188 BEGAIN-003 protein_coding Homo_sapiens 0 1129
ENST00000556751 BEGAIN-002 protein_coding Homo_sapiens 0 1838
ENST00000557378 BEGAIN-007 protein_coding Homo_sapiens 0 728

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