C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Meis homeobox 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041420 Meis3 10090 + 7:16175090-16186504 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000002495 Meis3-001 16175430-16186504 protein_coding
  ENSMUST00000175946 Meis3-004 16175388-16186501 retained_intron
  ENSMUST00000176342 Meis3-007 16175090-16178793 protein_coding
  ENSMUST00000176446 Meis3-009 16179042-16185515 nonsense_mediated_decay
  ENSMUST00000176506 Meis3-002 16175275-16186504 protein_coding
  ENSMUST00000176714 Meis3-010 16184090-16186504 retained_intron
  ENSMUST00000177156 Meis3-005 16175430-16186504 nonsense_mediated_decay
  ENSMUST00000177540 Meis3-008 16175139-16178791 protein_coding
  ENSMUST00000183527 Meis3-011 16177746-16178474 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002495ENSMUST00000175946ENSMUST00000176342ENSMUST00000176446ENSMUST00000176506ENSMUST00000176714ENSMUST00000177156ENSMUST00000177540
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002495 3.474±0.76 N/A 6.314±0.88 18.136±2.84 3.041±0.57 N/A 0.948±0.10 0.338±0.13 0.427±0.13 N/A 0.360±0.14 4.099±2.45 2.107±1.59 0.499±0.27
ENSMUST00000175946 4.997±1.41 2.748±1.18 6.378±1.14 27.207±1.25 4.703±0.42 4.716±1.13 0.609±0.04 0.629±0.22 0.455±0.23 1.884±0.29 0.476±0.12 4.970±1.92 1.465±0.75 0.306±0.20
ENSMUST00000176342 N/A 6.226±0.53 N/A N/A 7.521±0.00 N/A N/A N/A 0.251±0.04 N/A N/A N/A N/A N/A
ENSMUST00000176446 N/A N/A N/A 31.169±0.00 N/A N/A N/A N/A N/A N/A 0.523±0.14 8.740±2.92 3.348±1.57 0.274±0.00
ENSMUST00000176506 1.886±0.34 2.944±0.00 3.616±0.98 12.224±1.02 2.102±0.00 1.934±0.45 0.830±0.00 0.282±0.02 0.241±0.05 0.974±0.08 0.181±0.01 2.507±0.40 1.382±1.02 0.248±0.06
ENSMUST00000176714 N/A N/A N/A N/A 3.019±0.00 N/A 0.414±0.00 N/A 0.167±0.00 N/A N/A N/A N/A N/A
ENSMUST00000177156 N/A N/A N/A N/A N/A N/A N/A N/A 0.065±0.02 N/A N/A N/A 1.583±0.29 N/A
ENSMUST00000177540 7.009±0.00 21.367±7.25 N/A N/A 11.136±2.67 6.453±1.97 N/A 0.698±0.12 0.261±0.02 4.088±1.91 N/A 12.611±2.42 N/A 0.398±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G1 CIL_0008G1_0002 VISTA 7:16104746-16706411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IEA DNA binding
GO:0003682 IDA chromatin binding
GO:0005634 IDA nucleus
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0051897 IMP positive regulation of protein kinase B signaling
GO:2001234 IMP negative regulation of apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000105419 MEIS3 Meis homeobox 3 protein_coding Homo_sapiens

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