C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Meis homeobox 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176506 Meis3-002 ENSMUSG00000041420 10090 + 7:16175275-16186504 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000176506
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000176506 1.886±0.34 2.944±0.00 3.616±0.98 12.224±1.02 2.102±0.00 1.934±0.45 0.830±0.00 0.282±0.02 0.241±0.05 0.974±0.08 0.181±0.01 2.507±0.40 1.382±1.02 0.248±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G1 CIL_0008G1_0002 VISTA 7:16104746-16706411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003682 IDA chromatin binding
GO:0005634 IDA nucleus
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0051897 IMP positive regulation of protein kinase B signaling
GO:2001234 IMP negative regulation of apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000129114 protein_coding Danio_rerio 0 204
ENST00000331559 MEIS3-001 protein_coding Homo_sapiens 0 885
ENST00000418141 MEIS3P2-001 processed_pseudogene Homo_sapiens 0 1074
ENST00000441740 MEIS3-002 protein_coding Homo_sapiens 0 1253
ENST00000495167 MEIS3P1-001 processed_pseudogene Homo_sapiens 0 985
ENST00000557833 MEIS3-013 protein_coding Homo_sapiens 0 444
ENST00000558555 MEIS3-005 protein_coding Homo_sapiens 0 800
ENST00000559338 MEIS3-014 protein_coding Homo_sapiens 0 446
ENST00000559524 MEIS3-003 protein_coding Homo_sapiens 0 449
ENST00000560245 MEIS3-008 protein_coding Homo_sapiens 0 815
ENST00000560253 MEIS3-012 processed_transcript Homo_sapiens 0 529
ENST00000561096 MEIS3-011 protein_coding Homo_sapiens 0 815
ENST00000561204 MEIS3-009 retained_intron Homo_sapiens 0 815
ENST00000561293 MEIS3-007 protein_coding Homo_sapiens 0 449

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