C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: propionyl-Coenzyme A carboxylase, alpha polypeptide
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041650 Pcca 10090 + 14:122534324-122891100 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038374 Pcca-001 122534339-122889944 protein_coding
  ENSMUST00000128893 Pcca-010 122737900-122813593 retained_intron
  ENSMUST00000132444 Pcca-011 122790399-122889820 protein_coding
  ENSMUST00000135578 Pcca-008 122534345-122650284 protein_coding
  ENSMUST00000138836 Pcca-012 122886903-122889828 retained_intron
  ENSMUST00000140517 Pcca-002 122875935-122891100 processed_transcript
  ENSMUST00000143240 Pcca-007 122602919-122664327 processed_transcript
  ENSMUST00000147018 Pcca-004 122714029-122737995 nonsense_mediated_decay
  ENSMUST00000148172 Pcca-006 122534324-122582977 retained_intron
  ENSMUST00000152383 Pcca-003 122714055-122889825 nonsense_mediated_decay
  ENSMUST00000154206 Pcca-005 122534331-122616809 protein_coding
  ENSMUST00000156755 Pcca-009 122714119-122813247 processed_transcript
  ENSMUST00000177312 Pcca-013 122582684-122889828 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038374ENSMUST00000135578
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038374 20.758±2.02 19.746±1.40 6.164±0.65 8.779±2.78 25.185±11.37 11.016±1.52 11.495±6.25 35.986±9.39 21.212±9.73 8.912±1.25 13.561±3.41 13.631±4.09 4.748±2.96 10.151±2.20
ENSMUST00000135578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 33.403±0.00 18.909±13.22 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093F CIL_00093F_0002 VISTA 14:121953729-122558284
CIL_0007LI CIL_0007LI_0002 UCNEbase 14:122256414-122883962
CIL_0000WI CIL_0000WI_0002 CGP 14:122534324-122913757

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004075 IEA biotin carboxylase activity
GO:0004658 IMP propionyl-CoA carboxylase activity
GO:0005524 IEA ATP binding
GO:0005576 IEA extracellular region
GO:0005739 IDA mitochondrion
GO:0008152 IEA metabolic process
GO:0019836 IEA hemolysis by symbiont of host erythrocytes
GO:0019899 IEA enzyme binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028982 pcca propionyl-Coenzyme A carboxylase, alpha polypeptide protein_coding Danio_rerio
ENSG00000175198 PCCA propionyl CoA carboxylase, alpha polypeptide protein_coding Homo_sapiens

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