C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sperm antigen with calponin homology and coiled-coil domains 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042331 Specc1 10090 + 11:61956779-62223013 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049836 Specc1-001 61956779-62141726 protein_coding
  ENSMUST00000092415 Specc1-002 62077024-62223005 protein_coding
  ENSMUST00000108709 Specc1-201 62029276-62223013 protein_coding
  ENSMUST00000136971 Specc1-003 61956810-62045484 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049836ENSMUST00000092415ENSMUST00000108709
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049836 0.211±0.00 N/A 0.821±0.00 2.211±0.00 0.451±0.05 N/A 0.227±0.00 N/A 1.511±2.72 1.208±0.00 0.088±0.03 N/A N/A 0.928±0.00
ENSMUST00000092415 0.795±0.51 1.106±0.39 2.351±0.00 4.134±0.86 0.869±0.36 5.863±0.79 0.111±0.00 2.061±0.61 0.243±0.02 2.769±0.08 0.134±0.04 1.629±0.52 8.404±2.62 1.187±0.23
ENSMUST00000108709 0.360±0.03 N/A N/A 4.516±3.75 N/A N/A 0.347±0.00 1.515±0.00 10.905±3.98 2.592±0.00 0.158±0.02 0.691±0.35 N/A 0.896±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073H CIL_00073H_0002 CGP 11:61871307-62223013

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029480 specc1 sperm antigen with calponin homology and coiled-coil domains 1 protein_coding Danio_rerio
ENSG00000128487 SPECC1 sperm antigen with calponin homology and coiled-coil domains 1 protein_coding Homo_sapiens

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