C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sperm antigen with calponin homology and coiled-coil domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049836 Specc1-001 ENSMUSG00000042331 10090 + 11:61956779-62141726 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverLungMuscleTestisENSMUST00000049836
Transcript ID Adipose Bladder Brain Breast Heart Liver Lung Muscle Testis
ENSMUST00000049836 0.211±0.00 0.821±0.00 2.211±0.00 0.451±0.05 0.227±0.00 1.511±2.72 1.208±0.00 0.088±0.03 0.928±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073H CIL_00073H_0002 CGP 11:61871307-62223013

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261503 SPECC1-018 protein_coding Homo_sapiens 0 2091
ENST00000395522 SPECC1-003 protein_coding Homo_sapiens 0 2006
ENST00000395525 SPECC1-026 protein_coding Homo_sapiens 0 2030
ENST00000395527 SPECC1-027 protein_coding Homo_sapiens 0 2091
ENST00000395529 SPECC1-002 protein_coding Homo_sapiens 0 2235
ENST00000395530 SPECC1-004 protein_coding Homo_sapiens 0 1886
ENST00000413167 SPECC1-007 processed_transcript Homo_sapiens 0 348
ENST00000472876 SPECC1-006 processed_transcript Homo_sapiens 0 568
ENST00000579688 SPECC1-010 processed_transcript Homo_sapiens 0 311
ENST00000582063 SPECC1-012 processed_transcript Homo_sapiens 0 311
ENST00000583463 SPECC1-020 protein_coding Homo_sapiens 0 333
ENST00000584527 SPECC1-028 protein_coding Homo_sapiens 2e-35 154

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