C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: claspin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042489 Clspn 10090 + 4:126556935-126593903 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048391 Clspn-001 126556935-126593903 protein_coding
  ENSMUST00000123695 Clspn-002 126557005-126563837 processed_transcript
  ENSMUST00000126512 Clspn-006 126566555-126577748 protein_coding
  ENSMUST00000128202 Clspn-007 126581319-126591244 processed_transcript
  ENSMUST00000129795 Clspn-004 126560278-126566273 protein_coding
  ENSMUST00000146944 Clspn-005 126572415-126575248 processed_transcript
  ENSMUST00000147675 Clspn-003 126556995-126560286 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048391ENSMUST00000123695ENSMUST00000126512ENSMUST00000128202ENSMUST00000147675
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048391 0.028±0.00 0.065±0.05 0.234±0.00 1.412±1.02 0.132±0.04 0.235±0.09 0.080±0.03 0.059±0.01 4.585±5.71 0.095±0.05 0.022±0.02 0.739±0.54 3.076±2.49 1.168±1.09
ENSMUST00000123695 N/A N/A N/A N/A N/A 0.232±0.00 N/A 0.035±0.00 N/A 0.029±0.00 N/A 0.136±0.00 N/A N/A
ENSMUST00000126512 N/A 0.247±0.06 N/A N/A 0.262±0.16 0.650±0.00 0.068±0.00 0.048±0.01 0.039±0.00 0.156±0.12 N/A 0.812±0.00 N/A N/A
ENSMUST00000128202 N/A N/A N/A 2.920±0.00 N/A N/A N/A N/A N/A N/A N/A 4.396±4.82 12.574±11.26 16.808±0.00
ENSMUST00000147675 0.078±0.00 N/A N/A N/A N/A N/A 0.149±0.00 0.080±0.00 0.181±0.00 N/A 0.128±0.04 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JU CIL_0002JU_0002 CGP 4:126489541-126593903

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000077 IEA DNA damage checkpoint
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0006281 IEA DNA repair
GO:0010997 IEA anaphase-promoting complex binding
GO:0018105 IEA peptidyl-serine phosphorylation
GO:0031572 ISS G2 DNA damage checkpoint
GO:0032147 IEA activation of protein kinase activity
GO:0033314 IEA mitotic DNA replication checkpoint

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087655 claspin protein_coding Danio_rerio
ENSG00000092853 CLSPN claspin protein_coding Homo_sapiens

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