C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002JU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000086514-ENSDARG00000087655 CGP 7955 19:49521881-49563702
GeneTranscriptPositionBiotype
ENSDARG00000086514 (ago4)
argonaute RISC catalytic component 4 		ENSDART00000129463 (ago4-201) 49521881-49553686 protein_coding
ENSDARG00000087655 ()
claspin 		ENSDART00000127822 () 49560266-49563702 protein_coding
CIL_0002JU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042500-ENSMUSG00000042489 CGP 10090 4:126489541-126593903
GeneTranscriptPositionBiotype
ENSMUSG00000042489 (Clspn)
claspin 		ENSMUST00000048391 (Clspn-001) 126556935-126593903 protein_coding
ENSMUST00000123695 (Clspn-002) 126557005-126563837 processed_transcript
ENSMUST00000126512 (Clspn-006) 126566555-126577748 protein_coding
ENSMUST00000128202 (Clspn-007) 126581319-126591244 processed_transcript
ENSMUST00000129795 (Clspn-004) 126560278-126566273 protein_coding
ENSMUST00000146944 (Clspn-005) 126572415-126575248 processed_transcript
ENSMUST00000147675 (Clspn-003) 126556995-126560286 protein_coding
ENSMUSG00000042500 (Ago4)
argonaute RISC catalytic subunit 4 		ENSMUST00000084289 (Ago4-001) 126489541-126533472 protein_coding
ENSMUST00000122951 (Ago4-002) 126515477-126516912 processed_transcript
ENSMUSG00000081319 (Gm12936)
predicted gene 12936 		ENSMUST00000121439 (Gm12936-001) 126584509-126584809 processed_pseudogene
ENSMUSG00000082888 (Gm12934)
predicted gene 12934 		ENSMUST00000119221 (Gm12934-001) 126524330-126524672 processed_pseudogene
ENSMUSG00000083461 (Gm12935)
predicted gene 12935 		ENSMUST00000119352 (Gm12935-001) 126521669-126522087 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002JU_0001ENSDARG00000086514ENSDART00000129463ENSDARG00000087655ENSDART00000127822CIL_0002JU_0002ENSMUSG00000042489ENSMUST00000048391ENSMUST00000123695ENSMUST00000126512ENSMUST00000128202ENSMUST00000129795ENSMUST00000146944ENSMUST00000147675ENSMUSG00000042500ENSMUST00000084289ENSMUST00000122951ENSMUSG00000081319ENSMUST00000121439ENSMUSG00000082888ENSMUST00000119221ENSMUSG00000083461ENSMUST00000119352
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002JU_0001ENSDARG00000086514ENSDART00000129463ENSDARG00000087655ENSDART00000127822CIL_0002JU_0002ENSMUSG00000042489ENSMUST00000048391ENSMUST00000123695ENSMUST00000126512ENSMUST00000128202ENSMUST00000147675ENSMUSG00000042500ENSMUST00000084289ENSMUSG00000081319ENSMUST00000121439ENSMUSG00000082888ENSMUST00000119221ENSMUSG00000083461ENSMUST00000119352
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000086514 ENSDART00000129463 N/A N/A N/A N/A N/A N/A 2.904±2.52 N/A 0.544±0.00 N/A 2.399±0.00 N/A N/A N/A
ENSDARG00000087655 ENSDART00000127822 N/A N/A N/A 1.147±1.03 N/A N/A 0.770±0.45 19.654±0.00 0.453±0.00 N/A 0.150±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042489 ENSMUST00000048391 0.028±0.00 0.065±0.05 0.234±0.00 1.412±1.02 0.132±0.04 0.235±0.09 0.080±0.03 0.059±0.01 4.585±5.71 0.095±0.05 0.022±0.02 0.739±0.54 3.076±2.49 1.168±1.09
ENSMUST00000123695 N/A N/A N/A N/A N/A 0.232±0.00 N/A 0.035±0.00 N/A 0.029±0.00 N/A 0.136±0.00 N/A N/A
ENSMUST00000126512 N/A 0.247±0.06 N/A N/A 0.262±0.16 0.650±0.00 0.068±0.00 0.048±0.01 0.039±0.00 0.156±0.12 N/A 0.812±0.00 N/A N/A
ENSMUST00000128202 N/A N/A N/A 2.920±0.00 N/A N/A N/A N/A N/A N/A N/A 4.396±4.82 12.574±11.26 16.808±0.00
ENSMUST00000129795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147675 0.078±0.00 N/A N/A N/A N/A N/A 0.149±0.00 0.080±0.00 0.181±0.00 N/A 0.128±0.04 N/A N/A N/A
ENSMUSG00000042500 ENSMUST00000084289 0.504±0.21 0.904±0.42 0.852±0.18 2.363±0.45 0.840±0.34 0.975±0.11 1.039±0.21 0.512±0.21 0.393±0.26 2.073±0.76 0.992±0.38 0.987±0.26 0.996±1.07 1.939±0.60
ENSMUST00000122951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081319 ENSMUST00000121439 N/A N/A 0.065±0.00 0.189±0.02 0.946±0.00 N/A N/A N/A 0.535±0.33 N/A N/A 0.846±0.42 0.726±0.50 N/A
ENSMUSG00000082888 ENSMUST00000119221 N/A N/A 0.175±0.05 0.246±0.07 0.536±0.00 N/A 0.197±0.00 0.196±0.01 0.054±0.00 N/A N/A N/A 0.026±0.00 N/A
ENSMUSG00000083461 ENSMUST00000119352 N/A N/A N/A 0.710±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.409±0.35 N/A

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