C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: claspin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126512 Clspn-006 ENSMUSG00000042489 10090 + 4:126566555-126577748 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverLungOvaryENSMUST00000126512
Transcript ID Adrenal Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000126512 0.247±0.06 0.262±0.16 0.650±0.00 0.068±0.00 0.048±0.01 0.039±0.00 0.156±0.12 0.812±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JU CIL_0002JU_0002 CGP 4:126489541-126593903

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000251195 CLSPN-001 protein_coding Homo_sapiens 0 896
ENST00000318121 CLSPN-005 protein_coding Homo_sapiens 0 896
ENST00000373220 CLSPN-003 protein_coding Homo_sapiens 0 896
ENST00000517467 CLSPN-006 retained_intron Homo_sapiens 0 512
ENST00000520551 CLSPN-004 protein_coding Homo_sapiens 0 721

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