C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 10b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120705 Tbc1d10b-001 ENSMUSG00000042492 10090 - 7:127197465-127208468 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120705
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120705 10.245±1.66 13.514±1.16 7.502±1.88 10.327±5.26 13.604±4.01 14.840±2.54 3.340±0.96 8.210±0.97 6.752±5.02 11.884±2.00 6.004±2.25 13.127±4.01 29.924±15.03 1.254±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WP CIL_0004WP_0002 CGP 7:127191660-127208468
CIL_0003V7 CIL_0003V7_0003 CGP 7:127197465-127214298

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 ISS Rab GTPase activator activity
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0032313 ISS regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0042147 IEA retrograde transport, endosome to Golgi

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000409939 TBC1D10B-001 protein_coding Homo_sapiens 0 2617
ENST00000464644 TBC1D10B-006 retained_intron Homo_sapiens 0 604
ENST00000475650 TBC1D10B-003 retained_intron Homo_sapiens 0 845
ENST00000475872 TBC1D10B-005 retained_intron Homo_sapiens 0 278
ENST00000478158 TBC1D10B-004 retained_intron Homo_sapiens 0 1384
ENST00000490703 TBC1D10B-007 protein_coding Homo_sapiens 0 643
ENST00000566671 TBC1D10B-008 retained_intron Homo_sapiens 0 521

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