C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carboxypeptidase A6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042501 Cpa6 10090 - 1:10324720-10719945 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035577 Cpa6-001 10324727-10719945 protein_coding
  ENSMUST00000140938 Cpa6-004 10595366-10719905 processed_transcript
  ENSMUST00000147575 Cpa6-003 10472475-10477823 retained_intron
  ENSMUST00000153695 Cpa6-002 10324720-10719945 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035577ENSMUST00000140938ENSMUST00000147575ENSMUST00000153695
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035577 0.145±0.02 N/A 1.451±0.02 0.031±0.00 0.161±0.00 0.502±0.25 N/A N/A 0.036±0.00 N/A N/A N/A 0.160±0.03 N/A
ENSMUST00000140938 N/A N/A N/A 0.079±0.00 0.431±0.00 0.568±0.00 N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A
ENSMUST00000147575 0.072±0.00 0.354±0.15 0.096±0.01 0.112±0.08 0.112±0.07 0.111±0.03 0.085±0.03 0.110±0.04 0.067±0.05 0.150±0.05 0.011±0.00 0.240±0.14 0.061±0.06 0.178±0.04
ENSMUST00000153695 N/A N/A N/A 0.175±0.00 0.187±0.07 0.315±0.15 N/A N/A 0.024±0.02 N/A N/A 0.157±0.00 0.125±0.10 0.524±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BT CIL_0005BT_0003 CGP 1:10137571-10719945
CIL_0005BU CIL_0005BU_0003 CGP 1:10324720-11303681

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004181 IEA metallocarboxypeptidase activity
GO:0005575 ND cellular_component
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012013 cpa6 carboxypeptidase A6 protein_coding Danio_rerio
ENSG00000165078 CPA6 carboxypeptidase A6 protein_coding Homo_sapiens

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