C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carboxypeptidase A6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153695 Cpa6-002 ENSMUSG00000042501 10090 - 1:10324720-10719945 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverOvaryPlacentaTestisENSMUST00000153695
Transcript ID Brain Breast Colon Liver Ovary Placenta Testis
ENSMUST00000153695 0.175±0.00 0.187±0.07 0.315±0.15 0.024±0.02 0.157±0.00 0.125±0.10 0.524±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BT CIL_0005BT_0003 CGP 1:10137571-10719945
CIL_0005BU CIL_0005BU_0003 CGP 1:10324720-11303681

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297770 CPA6-001 protein_coding Homo_sapiens 0 1105
ENST00000479862 CPA6-002 nonsense_mediated_decay Homo_sapiens 0 797
ENST00000518549 CPA6-003 protein_coding Homo_sapiens 0 540

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