C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carboxypeptidase A6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147575 Cpa6-003 ENSMUSG00000042501 10090 - 1:10472475-10477823 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000147575
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000147575 0.072±0.00 0.354±0.15 0.096±0.01 0.112±0.08 0.112±0.07 0.111±0.03 0.085±0.03 0.110±0.04 0.067±0.05 0.150±0.05 0.011±0.00 0.240±0.14 0.061±0.06 0.178±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BT CIL_0005BT_0003 CGP 1:10137571-10719945
CIL_0005BU CIL_0005BU_0003 CGP 1:10324720-11303681

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267814 SORD-001 protein_coding Homo_sapiens 0.000000003 69
ENST00000296519 CEP44-201 protein_coding Homo_sapiens 0.00000001 68
ENST00000297770 CPA6-001 protein_coding Homo_sapiens 1e-29 135
ENST00000371375 PLCE1-002 protein_coding Homo_sapiens 0.00003 57
ENST00000372827 BMP8B-001 protein_coding Homo_sapiens 0.00000001 68
ENST00000396791 CEP44-003 nonsense_mediated_decay Homo_sapiens 0.000000009 68
ENST00000464214 PLCE1-003 processed_transcript Homo_sapiens 0.000003 57
ENST00000479862 CPA6-002 nonsense_mediated_decay Homo_sapiens 9e-30 135
ENST00000503780 CEP44-001 protein_coding Homo_sapiens 0.00000001 68
ENST00000518549 CPA6-003 protein_coding Homo_sapiens 1e-29 135
ENST00000580838 PTPRM-015 processed_transcript Homo_sapiens 0.00000000000005 82

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