C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH2B adaptor protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042594 Sh2b3 10090 - 5:121815488-121836859 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040308 Sh2b3-002 121817216-121836821 protein_coding
  ENSMUST00000086310 Sh2b3-001 121815648-121836859 protein_coding
  ENSMUST00000118580 Sh2b3-004 121817290-121836817 protein_coding
  ENSMUST00000122426 Sh2b3-005 121817010-121836104 protein_coding
  ENSMUST00000136960 Sh2b3-003 121815488-121836825 nonsense_mediated_decay
  ENSMUST00000137682 Sh2b3-006 121828568-121836264 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040308ENSMUST00000086310ENSMUST00000118580ENSMUST00000136960
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040308 N/A 9.641±1.38 N/A 11.620±4.13 4.040±0.00 N/A N/A N/A 9.236±2.10 N/A 8.188±1.52 N/A 22.187±3.35
ENSMUST00000086310 5.361±0.13 6.723±0.00 5.050±0.00 8.605±2.67 4.366±0.94 4.516±0.18 4.126±0.58 3.343±0.46 9.330±1.80 N/A N/A 2.357±0.15 19.995±7.52
ENSMUST00000118580 N/A 9.600±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136960 6.249±1.47 10.065±1.52 7.788±0.74 9.942±4.16 5.463±3.00 4.108±1.10 4.109±0.32 3.771±1.14 11.876±1.37 3.295±0.78 6.141±1.04 4.869±1.55 10.262±1.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TJ CIL_0008TJ_0002 VISTA 5:121625608-122227679
CIL_000903 CIL_000903_0002 VISTA 5:121732502-122333355
CIL_0008YU CIL_0008YU_0002 VISTA 5:121792218-122394768
CIL_0005LG CIL_0005LG_0002 CGP 5:121815488-121854599

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0005515 IPI protein binding
GO:0030097 IMP hemopoiesis
GO:0030154 IMP cell differentiation
GO:0032403 IEA protein complex binding
GO:0035162 IDA embryonic hemopoiesis
GO:0035556 IDA intracellular signal transduction
GO:0042301 IEA phosphate ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069958 sh2b3 SH2B adaptor protein 3 protein_coding Danio_rerio
ENSG00000111252 SH2B3 SH2B adaptor protein 3 protein_coding Homo_sapiens

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