C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH2B adaptor protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000086310 Sh2b3-001 ENSMUSG00000042594 10090 - 5:121815648-121836859 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungPlacentaTestisENSMUST00000086310
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Placenta Testis
ENSMUST00000086310 5.361±0.13 6.723±0.00 5.050±0.00 8.605±2.67 4.366±0.94 4.516±0.18 4.126±0.58 3.343±0.46 9.330±1.80 2.357±0.15 19.995±7.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TJ CIL_0008TJ_0002 VISTA 5:121625608-122227679
CIL_000903 CIL_000903_0002 VISTA 5:121732502-122333355
CIL_0008YU CIL_0008YU_0002 VISTA 5:121792218-122394768
CIL_0005LG CIL_0005LG_0002 CGP 5:121815488-121854599

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0005515 IPI protein binding
GO:0030097 IMP hemopoiesis
GO:0030154 IMP cell differentiation
GO:0032403 IEA protein complex binding
GO:0035162 IDA embryonic hemopoiesis
GO:0035556 IDA intracellular signal transduction
GO:0042301 IEA phosphate ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341259 SH2B3-001 protein_coding Homo_sapiens 0 835
ENST00000538307 SH2B3-002 protein_coding Homo_sapiens 0 728

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