C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005LG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069958-ENSDARG00000067546 CGP 7955 5:10107059-10356126
GeneTranscriptPositionBiotype
ENSDARG00000067546 (FAM109B)
family with sequence similarity 109, member B 		ENSDART00000097217 (FAM109B-201) 10355356-10356126 protein_coding
ENSDARG00000069958 (sh2b3)
SH2B adaptor protein 3 		ENSDART00000102236 (sh2b3-201) 10107059-10130872 protein_coding
ENSDART00000143347 (sh2b3-001) 10107059-10303137 protein_coding
CIL_0005LG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042594-ENSMUSG00000044134 CGP 10090 5:121815488-121854599
GeneTranscriptPositionBiotype
ENSMUSG00000042594 (Sh2b3)
SH2B adaptor protein 3 		ENSMUST00000040308 (Sh2b3-002) 121817216-121836821 protein_coding
ENSMUST00000086310 (Sh2b3-001) 121815648-121836859 protein_coding
ENSMUST00000118580 (Sh2b3-004) 121817290-121836817 protein_coding
ENSMUST00000122426 (Sh2b3-005) 121817010-121836104 protein_coding
ENSMUST00000136960 (Sh2b3-003) 121815488-121836825 nonsense_mediated_decay
ENSMUST00000137682 (Sh2b3-006) 121828568-121836264 protein_coding
ENSMUSG00000042605 (Atxn2)
ataxin 2 		ENSMUST00000051950 (Atxn2-001) 121711609-121814949 protein_coding
ENSMUST00000159828 (Atxn2-006) 121785074-121795422 retained_intron
ENSMUST00000159928 (Atxn2-013) 121805579-121814734 retained_intron
ENSMUST00000160093 (Atxn2-009) 121801323-121802265 processed_transcript
ENSMUST00000160220 (Atxn2-017) 121811460-121816493 nonsense_mediated_decay
ENSMUST00000160462 (Atxn2-014) 121806245-121813455 nonsense_mediated_decay
ENSMUST00000160813 (Atxn2-004) 121712969-121772787 processed_transcript
ENSMUST00000160821 (Atxn2-005) 121777929-121795011 protein_coding
ENSMUST00000161064 (Atxn2-002) 121749196-121814949 protein_coding
ENSMUST00000161159 (Atxn2-012) 121803008-121814631 protein_coding
ENSMUST00000161433 (Atxn2-016) 121810965-121811930 retained_intron
ENSMUST00000161836 (Atxn2-015) 121810664-121811533 retained_intron
ENSMUST00000161872 (Atxn2-008) 121797359-121803435 retained_intron
ENSMUST00000162327 (Atxn2-007) 121795034-121811629 protein_coding
ENSMUST00000162459 (Atxn2-010) 121801746-121810951 retained_intron
ENSMUST00000162611 (Atxn2-003) 121711337-121749183 processed_transcript
ENSMUST00000162995 (Atxn2-011) 121802230-121814475 protein_coding
ENSMUSG00000044134 (Fam109a)
family with sequence similarity 109, member A 		ENSMUST00000056654 (Fam109a-201) 121849028-121854599 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005LG_0001ENSDARG00000067546ENSDART00000097217ENSDARG00000069958ENSDART00000102236ENSDART00000143347CIL_0005LG_0002ENSMUSG00000042594ENSMUST00000040308ENSMUST00000086310ENSMUST00000118580ENSMUST00000122426ENSMUST00000136960ENSMUST00000137682ENSMUSG00000042605ENSMUST00000051950ENSMUST00000159828ENSMUST00000159928ENSMUST00000160093ENSMUST00000160220ENSMUST00000160462ENSMUST00000160813ENSMUST00000160821ENSMUST00000161064ENSMUST00000161159ENSMUST00000161433ENSMUST00000161836ENSMUST00000161872ENSMUST00000162327ENSMUST00000162459ENSMUST00000162611ENSMUST00000162995ENSMUSG00000044134ENSMUST00000056654
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005LG_0001ENSDARG00000067546ENSDART00000097217ENSDARG00000069958ENSDART00000102236ENSDART00000143347CIL_0005LG_0002ENSMUSG00000042594ENSMUST00000040308ENSMUST00000086310ENSMUST00000118580ENSMUST00000136960ENSMUSG00000042605ENSMUST00000051950ENSMUST00000161064ENSMUST00000161159ENSMUST00000162327ENSMUST00000162995ENSMUSG00000044134ENSMUST00000056654
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000067546 ENSDART00000097217 N/A N/A N/A 1.040±0.00 N/A N/A 0.496±0.22 N/A 0.313±0.00 N/A 0.094±0.00 N/A N/A N/A
ENSDARG00000069958 ENSDART00000102236 N/A N/A N/A 0.225±0.00 N/A N/A 0.320±0.00 0.859±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000143347 N/A N/A N/A 0.288±0.01 N/A N/A 0.984±0.49 0.631±0.00 N/A N/A 0.327±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042594 ENSMUST00000040308 N/A 9.641±1.38 N/A N/A 11.620±4.13 4.040±0.00 N/A N/A N/A 9.236±2.10 N/A 8.188±1.52 N/A 22.187±3.35
ENSMUST00000086310 5.361±0.13 6.723±0.00 5.050±0.00 N/A 8.605±2.67 4.366±0.94 4.516±0.18 4.126±0.58 3.343±0.46 9.330±1.80 N/A N/A 2.357±0.15 19.995±7.52
ENSMUST00000118580 N/A 9.600±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000122426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136960 6.249±1.47 10.065±1.52 7.788±0.74 N/A 9.942±4.16 5.463±3.00 4.108±1.10 4.109±0.32 3.771±1.14 11.876±1.37 3.295±0.78 6.141±1.04 4.869±1.55 10.262±1.19
ENSMUST00000137682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042605 ENSMUST00000051950 5.624±0.52 8.195±0.92 5.040±0.54 9.141±0.24 4.212±0.33 7.438±1.26 4.643±1.31 6.219±1.25 4.171±0.86 5.420±0.62 3.740±0.88 9.452±2.60 4.004±0.07 15.523±6.45
ENSMUST00000159828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161064 N/A 13.572±2.26 N/A 12.492±0.00 N/A N/A N/A N/A 4.226±0.00 N/A 4.231±0.71 10.673±1.80 7.596±4.26 6.471±0.00
ENSMUST00000161159 N/A N/A N/A 53.599±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 43.517±5.11 N/A
ENSMUST00000161433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162327 14.292±1.17 30.647±5.70 N/A 47.921±0.00 10.628±2.15 18.411±4.07 13.010±2.31 14.861±1.67 14.165±3.78 16.386±1.34 N/A 32.868±7.28 7.297±0.36 25.757±0.00
ENSMUST00000162459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162995 N/A 50.294±9.45 N/A N/A 19.052±1.01 34.853±7.92 19.716±3.09 18.632±1.95 14.564±0.13 N/A N/A 61.058±8.99 N/A N/A
ENSMUSG00000044134 ENSMUST00000056654 4.587±1.56 8.753±1.41 3.595±0.62 14.453±8.00 5.504±0.97 40.187±2.44 4.493±1.17 8.326±0.89 3.381±1.20 7.709±1.73 2.449±0.62 10.027±3.75 17.843±4.41 3.500±0.96

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