C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription factor AP-2, delta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042596 Tfap2d 10090 + 1:19103022-19166346 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037294 Tfap2d-001 19103022-19166346 protein_coding
  ENSMUST00000149505 Tfap2d-002 19107181-19148367 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainLiverENSMUST00000037294ENSMUST00000149505
Transcript ID Adipose Brain Liver
ENSMUST00000037294 0.017±0.00 2.391±1.85 0.023±0.00
ENSMUST00000149505 N/A 0.644±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MC CIL_0007MC_0006 UCNEbase 1:18307438-19700223
CIL_000813 CIL_000813_0002 VISTA 1:18655282-19257504
CIL_00096L CIL_00096L_0002 VISTA 1:18806734-19407712
CIL_0005MY CIL_0005MY_0002 CGP 1:19103022-19238576

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000977 IDA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0000981 IDA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005667 IPI transcription factor complex
GO:0006366 IDA transcription from RNA polymerase II promoter
GO:0043524 IMP negative regulation of neuron apoptotic process
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0061379 IMP inferior colliculus development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023272 tfap2d transcription factor AP-2 delta (activating enhancer binding protein 2 delta) protein_coding Danio_rerio
ENSG00000008197 TFAP2D transcription factor AP-2 delta (activating enhancer binding protein 2 delta) protein_coding Homo_sapiens

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