C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00096L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs865 VISTA 9606 6:50417531-51018524
GeneTranscriptPositionBiotype
ENSG00000008196 (TFAP2B)
transcription factor AP-2 beta (activating enhancer binding protein 2 beta) 		ENST00000344788 (TFAP2B-002) 50818723-50828679 protein_coding
ENST00000393655 (TFAP2B-001) 50818723-50847613 protein_coding
ENST00000489228 (TFAP2B-003) 50821785-50823865 processed_transcript
ENSG00000008197 (TFAP2D)
transcription factor AP-2 delta (activating enhancer binding protein 2 delta) 		ENST00000008391 (TFAP2D-001) 50713828-50772988 protein_coding
ENST00000492804 (TFAP2D-002) 50718042-50751274 processed_transcript
ENSG00000060303 (RPS17P5)
ribosomal protein S17 pseudogene 5 		ENST00000498293 (RPS17P5-001) 50857255-50857662 processed_pseudogene
ENSG00000216913 (RP4-753D5.3)
 ENST00000402760 (RP4-753D5.3-001) 50897615-50898225 processed_pseudogene
ENSG00000230204 (FTH1P5)
ferritin, heavy polypeptide 1 pseudogene 5 		ENST00000425761 (FTH1P5-001) 50912712-50913256 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_00096L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs865 VISTA 10090 1:18806734-19407712
GeneTranscriptPositionBiotype
ENSMUSG00000025927 (Tfap2b)
transcription factor AP-2 beta 		ENSMUST00000027059 (Tfap2b-001) 19208914-19238576 protein_coding
ENSMUST00000064976 (Tfap2b-003) 19212054-19234624 protein_coding
ENSMUST00000186972 (Tfap2b-005) 19213879-19219253 retained_intron
ENSMUST00000187754 (Tfap2b-002) 19208960-19238083 protein_coding
ENSMUST00000191068 (Tfap2b-004) 19212306-19214442 retained_intron
ENSMUSG00000042596 (Tfap2d)
transcription factor AP-2, delta 		ENSMUST00000037294 (Tfap2d-001) 19103022-19166346 protein_coding
ENSMUST00000149505 (Tfap2d-002) 19107181-19148367 processed_transcript
ENSMUSG00000060128 (Gm10075)
predicted gene 10075 		ENSMUST00000073196 (Gm10075-201) 19153310-19153966 pseudogene
ENSMUSG00000089787 (Gm15825)
predicted gene 15825 		ENSMUST00000159108 (Gm15825-001) 19063300-19104840 antisense
ENSMUSG00000099433 (RP23-122B3.2)
predicted gene 28344 		ENSMUST00000185704 (RP23-122B3.2-001) 19062857-19063135 processed_pseudogene
ENSMUSG00000100204 (RP24-119I6.5)
predicted gene 4849 		ENSMUST00000188428 (RP24-119I6.5-001) 19330939-19333184 processed_pseudogene
ENSMUSG00000100538 (RP24-119I6.2)
predicted gene 28340 		ENSMUST00000189218 (RP24-119I6.2-001) 19242725-19243769 lincRNA
ENSMUSG00000100720 (AC098736.2)
 ENSMUST00000162030 (AC098736.2-001) 19153422-19153966 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00096L_0001ENSG00000008196ENST00000344788ENST00000393655ENST00000489228ENSG00000008197ENST00000008391ENST00000492804ENSG00000060303ENST00000498293ENSG00000216913ENST00000402760ENSG00000230204ENST00000425761CIL_00096L_0002ENSMUSG00000025927ENSMUST00000027059ENSMUST00000064976ENSMUST00000186972ENSMUST00000187754ENSMUST00000191068ENSMUSG00000042596ENSMUST00000037294ENSMUST00000149505ENSMUSG00000060128ENSMUST00000073196ENSMUSG00000089787ENSMUST00000159108ENSMUSG00000099433ENSMUST00000185704ENSMUSG00000100204ENSMUST00000188428ENSMUSG00000100538ENSMUST00000189218ENSMUSG00000100720ENSMUST00000162030
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00096L_0001ENSG00000008196ENST00000344788ENST00000393655ENSG00000008197ENST00000008391ENST00000492804ENSG00000060303ENST00000498293ENSG00000216913ENST00000402760ENSG00000230204ENST00000425761CIL_00096L_0002ENSMUSG00000025927ENSMUST00000027059ENSMUST00000064976ENSMUST00000186972ENSMUST00000187754ENSMUST00000191068ENSMUSG00000042596ENSMUST00000037294ENSMUST00000149505ENSMUSG00000060128ENSMUST00000073196ENSMUSG00000089787ENSMUST00000159108ENSMUSG00000099433ENSMUST00000185704ENSMUSG00000100204ENSMUST00000188428ENSMUSG00000100538ENSMUST00000189218ENSMUSG00000100720ENSMUST00000162030
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000008196 ENST00000344788 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.00 N/A N/A
ENST00000393655 0.006±0.00 N/A N/A 0.005±0.00 0.426±0.00 N/A 0.004±0.00 2.578±0.00 0.025±0.02 N/A 0.011±0.00 0.019±0.01 0.237±0.00 0.758±0.00
ENST00000489228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000008197 ENST00000008391 N/A N/A N/A 0.104±0.00 N/A N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A N/A
ENST00000492804 N/A N/A N/A N/A 0.101±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000060303 ENST00000498293 0.136±0.00 0.148±0.00 N/A 0.225±0.00 0.262±0.00 0.240±0.00 0.033±0.00 0.037±0.00 N/A 0.035±0.00 0.158±0.00 0.078±0.00 N/A 0.195±0.00
ENSG00000216913 ENST00000402760 N/A N/A 0.535±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230204 ENST00000425761 0.152±0.00 0.133±0.00 N/A 0.218±0.00 0.269±0.00 0.124±0.00 0.130±0.03 0.263±0.17 0.206±0.00 0.320±0.00 0.203±0.00 N/A N/A 0.047±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025927 ENSMUST00000027059 N/A 0.404±0.21 0.007±0.00 9.080±7.44 0.758±0.28 N/A N/A 2.364±0.43 0.009±0.01 N/A 0.015±0.01 0.016±0.01 N/A 0.054±0.03
ENSMUST00000064976 N/A 2.153±0.98 N/A 0.289±0.00 1.156±0.00 N/A 0.023±0.01 1.653±0.00 N/A N/A N/A N/A N/A 0.126±0.02
ENSMUST00000186972 N/A 1.149±0.19 N/A N/A 3.334±0.59 N/A N/A 4.033±0.21 N/A N/A N/A 0.107±0.00 N/A 0.406±0.06
ENSMUST00000187754 0.010±0.00 0.541±0.10 0.051±0.01 8.058±0.32 1.347±0.24 N/A N/A 2.843±0.56 0.007±0.00 N/A 0.035±0.01 0.029±0.00 0.033±0.01 0.099±0.01
ENSMUST00000191068 0.172±0.00 1.543±0.76 N/A N/A 3.143±0.31 0.068±0.00 0.076±0.00 5.995±1.78 N/A N/A N/A 0.105±0.00 N/A N/A
ENSMUSG00000042596 ENSMUST00000037294 0.017±0.00 N/A N/A 2.391±1.85 N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A
ENSMUST00000149505 N/A N/A N/A 0.644±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000060128 ENSMUST00000073196 0.740±0.00 N/A 7.582±2.06 6.780±1.30 1.374±1.25 0.430±0.00 0.411±0.00 N/A 15.220±9.14 N/A 0.974±0.00 0.855±0.00 N/A N/A
ENSMUSG00000089787 ENSMUST00000159108 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00 N/A N/A N/A N/A
ENSMUSG00000099433 ENSMUST00000185704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.272±0.00
ENSMUSG00000100204 ENSMUST00000188428 N/A N/A 0.012±0.01 0.002±0.00 N/A N/A 0.014±0.00 0.018±0.00 0.012±0.00 0.054±0.00 0.023±0.00 0.019±0.01 0.025±0.01 0.044±0.02
ENSMUSG00000100538 ENSMUST00000189218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.319±0.57
ENSMUSG00000100720 ENSMUST00000162030 3.970±0.65 0.401±0.01 15.869±3.10 10.992±4.69 1.142±0.28 1.201±0.41 1.733±0.88 3.102±0.35 11.619±13.96 2.528±0.24 7.684±0.85 11.508±19.22 21.368±25.25 2.595±0.73

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