C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor AP-2, delta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037294 Tfap2d-001 ENSMUSG00000042596 10090 + 1:19103022-19166346 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainLiverENSMUST00000037294
Transcript ID Adipose Brain Liver
ENSMUST00000037294 0.017±0.00 2.391±1.85 0.023±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MC CIL_0007MC_0006 UCNEbase 1:18307438-19700223
CIL_000813 CIL_000813_0002 VISTA 1:18655282-19257504
CIL_00096L CIL_00096L_0002 VISTA 1:18806734-19407712
CIL_0005MY CIL_0005MY_0002 CGP 1:19103022-19238576

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000977 IDA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0000981 IDA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005667 IPI transcription factor complex
GO:0006366 IDA transcription from RNA polymerase II promoter
GO:0043524 IMP negative regulation of neuron apoptotic process
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0061379 IMP inferior colliculus development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000031167 tfap2d-001 protein_coding Danio_rerio 0 754
ENST00000008391 TFAP2D-001 protein_coding Homo_sapiens 0 2519
ENST00000492804 TFAP2D-002 processed_transcript Homo_sapiens 0 710

Loading