C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: junctophilin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042686 Jph1 10090 - 1:16964560-17097889 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038382 Jph1-001 16994938-17097889 protein_coding
  ENSMUST00000186024 Jph1-002 16964560-17004219 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038382
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038382 0.435±0.17 0.108±0.05 5.158±0.18 0.470±0.22 2.013±1.82 0.348±0.24 1.733±0.42 0.259±0.13 0.124±0.04 0.646±0.25 30.632±2.91 0.821±0.56 0.146±0.05 0.228±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OK CIL_0002OK_0002 CGP 1:16688051-17097889
CIL_00008Q CIL_00008Q_0003 CGP 1:16964560-17164271

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005886 IDA plasma membrane
GO:0007517 IMP muscle organ development
GO:0008307 IMP structural constituent of muscle
GO:0014701 IDA junctional sarcoplasmic reticulum membrane
GO:0016021 IEA integral component of membrane
GO:0016529 IDA sarcoplasmic reticulum
GO:0030018 IDA Z disc
GO:0030314 IDA junctional membrane complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038826 jph1b junctophilin 1b protein_coding Danio_rerio
ENSDARG00000058603 jph1a junctophilin 1a protein_coding Danio_rerio
ENSG00000104369 JPH1 junctophilin 1 protein_coding Homo_sapiens

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