C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00008Q_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000058603-ENSDARG00000058601 CGP 7955 24:14522995-14629896
GeneTranscriptPositionBiotype
ENSDARG00000058601 (gdap1)
ganglioside-induced differentiation-associated protein 1 		ENSDART00000134475 (gdap1-001) 14617909-14629896 protein_coding
ENSDARG00000058603 (jph1a)
junctophilin 1a 		ENSDART00000081495 (jph1a-201) 14522995-14615725 protein_coding
ENSDART00000131830 (jph1a-001) 14610484-14615730 protein_coding
CIL_00008Q_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104369-ENSG00000104381 CGP 9606 8:74234700-74488872
GeneTranscriptPositionBiotype
ENSG00000104369 (JPH1)
junctophilin 1 		ENST00000342232 (JPH1-001) 74234700-74321328 protein_coding
ENST00000518195 (JPH1-004) 74236803-74244788 processed_transcript
ENST00000519947 (JPH1-003) 74237233-74321327 nonsense_mediated_decay
ENSG00000104381 (GDAP1)
ganglioside induced differentiation associated protein 1 		ENST00000220822 (GDAP1-001) 74350382-74366876 protein_coding
ENST00000434412 (GDAP1-002) 74350418-74364604 protein_coding
ENST00000520797 (GDAP1-008) 74321514-74364260 processed_transcript
ENST00000521096 (GDAP1-007) 74321130-74364290 processed_transcript
ENST00000522568 (GDAP1-003) 74350444-74364741 nonsense_mediated_decay
ENST00000523640 (GDAP1-006) 74350434-74360248 processed_transcript
ENST00000524195 (GDAP1-005) 74362951-74488872 processed_transcript
ENST00000524366 (GDAP1-004) 74350444-74364029 processed_transcript
ENSG00000207417 (Y_RNA)
Y RNA 		ENST00000384686 (Y_RNA.1-761) 74376687-74376793 misc_RNA
ENSG00000253596 (CTD-2320G14.2)
 ENST00000521872 (CTD-2320G14.2-001) 74347757-74350050 antisense
CIL_00008Q_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042686-ENSMUSG00000025777 CGP 10090 1:16964560-17164271
GeneTranscriptPositionBiotype
ENSMUSG00000025777 (Gdap1)
ganglioside-induced differentiation-associated-protein 1 		ENSMUST00000026879 (Gdap1-001) 17145362-17164271 protein_coding
ENSMUST00000150457 (Gdap1-002) 17145404-17158744 retained_intron
ENSMUST00000189465 (Gdap1-004) 17158370-17162049 retained_intron
ENSMUST00000189736 (Gdap1-003) 17145468-17161631 nonsense_mediated_decay
ENSMUSG00000042686 (Jph1)
junctophilin 1 		ENSMUST00000038382 (Jph1-001) 16994938-17097889 protein_coding
ENSMUST00000186024 (Jph1-002) 16964560-17004219 nonsense_mediated_decay
ENSMUSG00000100110 (RP23-110G23.2)
predicted gene 28783 		ENSMUST00000188872 (RP23-110G23.2-001) 17124747-17128956 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00008Q_0001ENSDARG00000058601ENSDART00000134475ENSDARG00000058603ENSDART00000081495ENSDART00000131830CIL_00008Q_0002ENSG00000104369ENST00000342232ENST00000518195ENST00000519947ENSG00000104381ENST00000220822ENST00000434412ENST00000520797ENST00000521096ENST00000522568ENST00000523640ENST00000524195ENST00000524366ENSG00000207417ENST00000384686ENSG00000253596ENST00000521872CIL_00008Q_0003ENSMUSG00000025777ENSMUST00000026879ENSMUST00000150457ENSMUST00000189465ENSMUST00000189736ENSMUSG00000042686ENSMUST00000038382ENSMUST00000186024ENSMUSG00000100110ENSMUST00000188872
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00008Q_0001ENSDARG00000058601ENSDART00000134475ENSDARG00000058603ENSDART00000081495CIL_00008Q_0002ENSG00000104369ENST00000342232ENST00000519947ENSG00000104381ENST00000220822ENST00000434412ENST00000521096ENSG00000207417ENST00000384686ENSG00000253596ENST00000521872CIL_00008Q_0003ENSMUSG00000025777ENSMUST00000026879ENSMUST00000150457ENSMUST00000189465ENSMUST00000189736ENSMUSG00000042686ENSMUST00000038382ENSMUSG00000100110ENSMUST00000188872
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000058601 ENSDART00000134475 N/A N/A N/A 23.906±11.90 N/A N/A 2.011±0.68 2.144±0.79 N/A N/A 2.342±0.00 N/A N/A N/A
ENSDARG00000058603 ENSDART00000081495 N/A N/A N/A 1.621±0.32 N/A N/A 15.650±2.68 1.118±0.20 0.129±0.00 N/A 12.544±0.00 N/A N/A N/A
ENSDART00000131830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104369 ENST00000342232 N/A 0.237±0.00 0.183±0.00 3.672±0.00 2.522±0.00 0.409±0.00 2.682±0.00 0.585±0.00 0.397±0.00 0.528±0.08 20.971±7.06 1.554±0.00 0.329±0.00 0.720±0.07
ENST00000518195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519947 N/A N/A N/A N/A N/A N/A 3.922±0.00 N/A N/A N/A 24.760±13.21 N/A N/A N/A
ENSG00000104381 ENST00000220822 0.223±0.00 N/A 0.895±0.00 17.060±0.78 N/A N/A 0.212±0.00 0.429±0.00 N/A 1.206±0.00 N/A 1.180±0.61 N/A 1.203±0.00
ENST00000434412 N/A N/A N/A N/A N/A N/A N/A N/A 0.165±0.00 N/A N/A N/A N/A N/A
ENST00000520797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.557±0.00 0.472±0.00 2.765±0.00
ENST00000522568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207417 ENST00000384686 N/A N/A N/A N/A 30.628±0.00 N/A N/A N/A 164.561±0.00 257.943±0.00 N/A N/A N/A N/A
ENSG00000253596 ENST00000521872 N/A N/A N/A 0.475±0.33 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.124±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025777 ENSMUST00000026879 0.051±0.00 0.310±0.15 0.126±0.03 14.089±3.65 0.170±0.06 0.255±0.15 0.032±0.02 0.040±0.01 0.010±0.01 0.024±0.01 1.885±0.59 0.236±0.05 0.023±0.01 0.318±0.08
ENSMUST00000150457 N/A 0.330±0.14 N/A N/A 0.068±0.00 0.158±0.09 N/A 0.031±0.00 N/A N/A N/A 0.171±0.00 N/A 0.245±0.15
ENSMUST00000189465 0.011±0.00 0.133±0.08 0.022±0.00 N/A 0.037±0.01 0.048±0.00 0.017±0.00 0.013±0.00 0.005±0.00 0.036±0.00 N/A N/A 0.006±0.00 0.304±0.00
ENSMUST00000189736 0.040±0.00 0.208±0.04 N/A 56.847±0.00 N/A N/A N/A 0.043±0.02 N/A N/A N/A 0.395±0.34 0.130±0.00 2.503±0.00
ENSMUSG00000042686 ENSMUST00000038382 0.435±0.17 0.108±0.05 5.158±0.18 0.470±0.22 2.013±1.82 0.348±0.24 1.733±0.42 0.259±0.13 0.124±0.04 0.646±0.25 30.632±2.91 0.821±0.56 0.146±0.05 0.228±0.08
ENSMUST00000186024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000100110 ENSMUST00000188872 N/A N/A N/A 0.142±0.00 N/A N/A N/A N/A N/A N/A 0.326±0.09 N/A N/A 1.028±0.48

Loading