C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: rhomboid, veinlet-like 2 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000043333 Rhbdl2 10090 + 4:123787874-123829904 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053202 Rhbdl2-201 123787875-123829904 protein_coding
  ENSMUST00000106204 Rhbdl2-001 123809914-123829904 protein_coding
  ENSMUST00000124290 Rhbdl2-004 123787874-123811498 processed_transcript
  ENSMUST00000148797 Rhbdl2-005 123813335-123816299 processed_transcript
  ENSMUST00000150286 Rhbdl2-002 123798205-123810141 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053202ENSMUST00000106204ENSMUST00000124290ENSMUST00000148797ENSMUST00000150286
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053202 0.182±0.00 0.284±0.00 7.138±0.45 0.184±0.01 0.519±0.12 6.994±3.67 N/A 0.451±0.00 0.005±0.00 0.158±0.03 0.119±0.04 0.322±0.07 0.372±0.35 0.244±0.05
ENSMUST00000106204 0.490±0.11 0.287±0.19 N/A 0.258±0.00 0.547±0.36 12.023±5.32 0.082±0.05 0.413±0.18 0.018±0.01 0.215±0.01 0.088±0.02 0.596±0.25 0.109±0.00 0.839±0.15
ENSMUST00000124290 0.170±0.05 0.129±0.04 4.001±0.00 0.103±0.02 0.179±0.09 5.827±1.21 N/A 0.198±0.08 0.004±0.00 0.087±0.02 0.062±0.03 0.268±0.10 0.096±0.11 0.171±0.08
ENSMUST00000148797 0.298±0.00 N/A N/A 0.156±0.00 0.469±0.00 N/A 0.066±0.00 0.437±0.00 N/A 0.201±0.07 0.104±0.02 0.406±0.16 0.146±0.04 N/A
ENSMUST00000150286 N/A N/A N/A 0.901±0.00 N/A N/A N/A N/A 0.110±0.00 0.284±0.00 N/A 3.171±0.00 1.985±0.00 2.207±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000990 CIL_000990_0002 VISTA 4:123304867-123907516
CIL_0007Q3 CIL_0007Q3_0002 VISTA 4:123648792-124248792
CIL_0008G7 CIL_0008G7_0002 VISTA 4:123690360-124291795
CIL_0001ZS CIL_0001ZS_0002 CGP 4:123734559-123829904
CIL_0008PZ CIL_0008PZ_0002 VISTA 4:123735337-124336861

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IMP serine-type endopeptidase activity
GO:0005886 ISS plasma membrane
GO:0006508 IEA proteolysis
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069833 rhbdl2 rhomboid, veinlet-like 2 (Drosophila) protein_coding Danio_rerio
ENSG00000158315 RHBDL2 rhomboid, veinlet-like 2 (Drosophila) protein_coding Homo_sapiens

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