C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rhomboid, veinlet-like 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053202 Rhbdl2-201 ENSMUSG00000043333 10090 + 4:123787875-123829904 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053202
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053202 0.182±0.00 0.284±0.00 7.138±0.45 0.184±0.01 0.519±0.12 6.994±3.67 0.451±0.00 0.005±0.00 0.158±0.03 0.119±0.04 0.322±0.07 0.372±0.35 0.244±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000990 CIL_000990_0002 VISTA 4:123304867-123907516
CIL_0007Q3 CIL_0007Q3_0002 VISTA 4:123648792-124248792
CIL_0008G7 CIL_0008G7_0002 VISTA 4:123690360-124291795
CIL_0001ZS CIL_0001ZS_0002 CGP 4:123734559-123829904
CIL_0008PZ CIL_0008PZ_0002 VISTA 4:123735337-124336861

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IMP serine-type endopeptidase activity
GO:0005886 ISS plasma membrane
GO:0006508 IEA proteolysis
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000289248 RHBDL2-001 protein_coding Homo_sapiens 0 1011
ENST00000372990 RHBDL2-201 protein_coding Homo_sapiens 0 1011
ENST00000540558 RHBDL2-002 protein_coding Homo_sapiens 0 390

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