C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: opsin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000068355 Opn5-201 ENSMUSG00000043972 10090 - 17:42556783-42611313 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyMuscleTestisENSMUST00000068355
Transcript ID Bladder Brain Colon Kidney Muscle Testis
ENSMUST00000068355 0.011±0.01 0.089±0.00 0.044±0.00 0.023±0.00 0.022±0.00 0.023±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IDA G-protein coupled receptor activity
GO:0005502 IDA 11-cis retinal binding
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007601 IEA visual perception
GO:0007602 IEA phototransduction
GO:0009881 IEA photoreceptor activity
GO:0016021 IEA integral component of membrane
GO:0018298 IEA protein-chromophore linkage

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000244799 OPN5-001 processed_transcript Homo_sapiens 0 780
ENST00000371211 OPN5-003 protein_coding Homo_sapiens 0 1371
ENST00000393699 OPN5-005 protein_coding Homo_sapiens 0 1369
ENST00000489301 OPN5-002 protein_coding Homo_sapiens 0 1607
ENST00000510695 OPN5-006 processed_transcript Homo_sapiens 2e-28 130

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