C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1110034G24 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000044991 1110034G24Rik 10090 + 2:132686931-132751055 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000061891 1110034G24Rik-001 132686931-132751055 protein_coding
  ENSMUST00000110132 1110034G24Rik-002 132690283-132751055 protein_coding
  ENSMUST00000141460 1110034G24Rik-004 132698119-132750582 processed_transcript
  ENSMUST00000148271 1110034G24Rik-003 132690157-132750503 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000061891ENSMUST00000110132ENSMUST00000148271
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000061891 6.560±1.17 7.131±1.41 4.665±0.41 4.197±2.49 6.346±1.46 4.369±1.51 14.958±5.10 5.772±1.01 6.017±2.08 6.705±1.44 2.916±0.57 6.371±2.29 5.530±2.87 0.996±0.38
ENSMUST00000110132 1.563±0.63 1.673±0.64 1.249±0.20 1.496±0.89 1.867±0.40 1.057±0.22 N/A 1.341±0.19 0.661±0.19 2.449±0.75 0.462±0.11 2.694±1.37 N/A 0.317±0.07
ENSMUST00000148271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.770±0.00 N/A 2.398±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057F CIL_00057F_0002 CGP 2:132529082-132751055
CIL_0005V9 CIL_0005V9_0002 CGP 2:132686931-132795079

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000171984 C20orf196 chromosome 20 open reading frame 196 protein_coding Homo_sapiens

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