C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00057F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125772-ENSG00000171984 CGP 9606 20:5544439-5863912
GeneTranscriptPositionBiotype
ENSG00000125772 (GPCPD1)
glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 		ENST00000379019 (GPCPD1-001) 5544439-5611026 protein_coding
ENST00000418646 (GPCPD1-004) 5544439-5575508 protein_coding
ENST00000462080 (GPCPD1-006) 5547341-5548381 processed_transcript
ENST00000473797 (GPCPD1-005) 5567521-5574123 processed_transcript
ENST00000481038 (GPCPD1-002) 5544439-5586037 processed_transcript
ENST00000481690 (GPCPD1-003) 5575900-5610924 processed_transcript
ENSG00000171984 (C20orf196)
chromosome 20 open reading frame 196 		ENST00000303142 (C20orf196-001) 5750397-5863912 protein_coding
ENST00000378979 (C20orf196-005) 5750393-5773447 protein_coding
ENST00000442185 (C20orf196-003) 5750453-5863304 protein_coding
ENST00000445603 (C20orf196-004) 5750437-5863208 protein_coding
ENSG00000233578 (RP5-1022P6.3)
 ENST00000422311 (RP5-1022P6.3-001) 5548840-5549481 processed_pseudogene
CIL_00057F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027346-ENSMUSG00000044991 CGP 10090 2:132529082-132751055
GeneTranscriptPositionBiotype
ENSMUSG00000027346 (Gpcpd1)
glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 		ENSMUST00000028822 (Gpcpd1-006) 132532726-132578133 protein_coding
ENSMUST00000060955 (Gpcpd1-001) 132529082-132578233 protein_coding
ENSMUST00000110135 (Gpcpd1-011) 132553957-132587729 protein_coding
ENSMUST00000110136 (Gpcpd1-004) 132529082-132578187 protein_coding
ENSMUST00000110142 (Gpcpd1-201) 132529083-132578248 protein_coding
ENSMUST00000124107 (Gpcpd1-010) 132550462-132578187 protein_coding
ENSMUST00000124632 (Gpcpd1-012) 132534152-132538127 nonsense_mediated_decay
ENSMUST00000127712 (Gpcpd1-007) 132529082-132542031 retained_intron
ENSMUST00000131617 (Gpcpd1-008) 132564627-132578246 processed_transcript
ENSMUST00000140867 (Gpcpd1-009) 132554069-132578217 processed_transcript
ENSMUST00000145694 (Gpcpd1-002) 132529082-132578248 nonsense_mediated_decay
ENSMUST00000148833 (Gpcpd1-005) 132529082-132578178 nonsense_mediated_decay
ENSMUST00000149854 (Gpcpd1-003) 132529082-132578235 nonsense_mediated_decay
ENSMUSG00000044991 (1110034G24Rik)
RIKEN cDNA 1110034G24 gene 		ENSMUST00000061891 (1110034G24Rik-001) 132686931-132751055 protein_coding
ENSMUST00000110132 (1110034G24Rik-002) 132690283-132751055 protein_coding
ENSMUST00000141460 (1110034G24Rik-004) 132698119-132750582 processed_transcript
ENSMUST00000148271 (1110034G24Rik-003) 132690157-132750503 protein_coding
ENSMUSG00000064413 (Gm22245)
predicted gene, 22245 		ENSMUST00000082479 (Gm22245-201) 132717106-132717208 snRNA
ENSMUSG00000074783 (AU019990)
expressed sequence AU019990 		ENSMUST00000138751 (AU019990-003) 132645881-132652999 lincRNA
ENSMUST00000143964 (AU019990-001) 132598195-132650156 lincRNA
ENSMUST00000153028 (AU019990-002) 132598195-132653068 lincRNA
ENSMUSG00000081445 (Rpl23a-ps4)
ribosomal protein L23A, pseudogene 4 		ENSMUST00000121008 (Rpl23a-ps4-001) 132662242-132662696 processed_pseudogene
ENSMUSG00000081662 (Gm14098)
predicted gene 14098 		ENSMUST00000119295 (Gm14098-001) 132678269-132679239 processed_pseudogene
ENSMUSG00000084089 (Gm14099)
predicted gene 14099 		ENSMUST00000117769 (Gm14099-001) 132673385-132673989 processed_pseudogene
ENSMUSG00000084839 (Gm14097)
predicted gene 14097 		ENSMUST00000147868 (Gm14097-001) 132694432-132698523 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00057F_0001ENSG00000125772ENST00000379019ENST00000418646ENST00000462080ENST00000473797ENST00000481038ENST00000481690ENSG00000171984ENST00000303142ENST00000378979ENST00000442185ENST00000445603ENSG00000233578ENST00000422311CIL_00057F_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00057F_0001ENSG00000125772ENST00000379019ENST00000418646ENST00000481038ENST00000481690ENSG00000171984ENST00000303142ENST00000378979ENST00000442185ENST00000445603ENSG00000233578ENST00000422311CIL_00057F_0002ENSMUSG00000027346ENSMUST00000028822ENSMUST00000060955ENSMUST00000110136ENSMUST00000110142ENSMUST00000127712ENSMUST00000145694ENSMUST00000148833ENSMUST00000149854ENSMUSG00000044991ENSMUST00000061891ENSMUST00000110132ENSMUST00000148271ENSMUSG00000064413ENSMUST00000082479ENSMUSG00000074783ENSMUST00000138751ENSMUST00000143964ENSMUST00000153028ENSMUSG00000081445ENSMUST00000121008ENSMUSG00000081662ENSMUST00000119295ENSMUSG00000084089ENSMUST00000117769ENSMUSG00000084839ENSMUST00000147868
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125772 ENST00000379019 2.256±0.00 3.367±0.00 N/A 4.195±1.46 7.636±6.94 2.715±1.41 2.240±0.75 2.302±0.16 1.755±1.41 8.729±6.75 3.050±0.54 6.662±2.37 3.725±0.31 4.913±1.36
ENST00000418646 N/A N/A N/A N/A N/A N/A N/A N/A 0.194±0.00 1.138±0.00 N/A 2.582±0.00 N/A N/A
ENST00000462080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481038 0.503±0.00 1.544±0.00 N/A N/A 0.894±0.00 3.123±0.00 0.499±0.25 1.018±0.49 2.550±0.00 0.629±0.00 N/A 5.608±3.02 N/A N/A
ENST00000481690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.812±0.00 14.539±0.00
ENSG00000171984 ENST00000303142 0.300±0.00 2.662±0.00 N/A 1.111±0.19 0.643±0.47 2.189±0.00 0.398±0.35 0.606±0.50 0.127±0.08 0.290±0.00 1.320±1.15 2.803±1.96 2.364±1.69 1.424±0.81
ENST00000378979 0.432±0.00 1.340±0.00 0.334±0.00 N/A 0.826±0.00 1.655±0.00 0.722±0.00 0.796±0.00 0.334±0.00 0.711±0.06 0.424±0.26 3.851±0.00 0.774±0.24 0.717±0.28
ENST00000442185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.454±0.00 N/A
ENST00000445603 1.051±0.00 1.865±0.00 0.146±0.00 0.583±0.18 0.520±0.00 0.355±0.00 N/A N/A N/A 0.257±0.00 N/A 0.774±0.56 N/A N/A
ENSG00000233578 ENST00000422311 N/A 0.447±0.00 N/A 0.054±0.00 1.414±0.64 N/A 0.081±0.03 N/A N/A 2.671±0.00 N/A 0.606±0.37 0.070±0.00 0.095±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027346 ENSMUST00000028822 1.981±0.43 0.897±0.70 N/A 3.699±0.00 N/A 0.836±0.13 N/A 0.686±0.06 5.249±2.01 2.323±0.27 N/A 2.772±1.32 5.371±2.25 2.655±1.24
ENSMUST00000060955 6.393±1.03 1.681±0.00 7.181±0.46 7.430±0.86 6.378±3.02 3.037±1.50 16.729±6.33 1.847±0.80 8.210±4.44 4.470±2.49 33.053±10.11 3.328±1.34 6.280±1.79 3.456±1.82
ENSMUST00000110135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110136 N/A 0.847±0.00 N/A N/A N/A 0.759±0.00 N/A N/A 3.216±0.69 N/A N/A 2.474±0.00 3.322±0.00 N/A
ENSMUST00000110142 2.282±0.00 0.768±0.00 2.410±0.48 3.686±0.67 N/A N/A 6.775±0.92 2.017±0.57 4.040±2.29 1.828±0.00 N/A 1.230±0.00 4.061±1.27 1.852±0.09
ENSMUST00000124107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127712 N/A 0.517±0.00 N/A 2.228±0.00 N/A N/A N/A N/A N/A 2.064±0.00 N/A 1.073±0.00 N/A 0.339±0.00
ENSMUST00000131617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145694 N/A N/A N/A N/A N/A N/A N/A 1.037±0.00 N/A N/A N/A 1.960±0.00 N/A N/A
ENSMUST00000148833 4.923±0.00 2.674±1.12 N/A N/A 4.699±0.48 4.177±0.00 9.650±1.71 3.120±0.79 4.223±0.00 2.656±0.00 N/A 3.964±1.76 3.308±1.17 N/A
ENSMUST00000149854 N/A 4.727±0.00 2.051±0.00 5.488±0.81 2.979±1.80 1.335±0.33 N/A 0.559±0.00 6.375±2.27 4.561±2.14 N/A 3.760±1.23 4.960±0.00 2.042±0.53
ENSMUSG00000044991 ENSMUST00000061891 6.560±1.17 7.131±1.41 4.665±0.41 4.197±2.49 6.346±1.46 4.369±1.51 14.958±5.10 5.772±1.01 6.017±2.08 6.705±1.44 2.916±0.57 6.371±2.29 5.530±2.87 0.996±0.38
ENSMUST00000110132 1.563±0.63 1.673±0.64 1.249±0.20 1.496±0.89 1.867±0.40 1.057±0.22 N/A 1.341±0.19 0.661±0.19 2.449±0.75 0.462±0.11 2.694±1.37 N/A 0.317±0.07
ENSMUST00000141460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.770±0.00 N/A 2.398±0.00 N/A
ENSMUSG00000064413 ENSMUST00000082479 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3595.920±0.00 N/A N/A N/A N/A
ENSMUSG00000074783 ENSMUST00000138751 0.742±0.05 0.463±0.00 0.036±0.01 0.668±0.56 0.200±0.05 12.122±5.86 0.097±0.00 0.345±0.19 0.179±0.06 0.170±0.00 0.292±0.22 0.632±0.31 0.455±0.30 0.496±0.37
ENSMUST00000143964 0.022±0.00 N/A N/A 0.005±0.00 N/A N/A 0.021±0.00 N/A 0.009±0.00 N/A N/A 0.069±0.04 0.028±0.02 N/A
ENSMUST00000153028 N/A N/A 0.028±0.00 N/A 0.080±0.02 N/A N/A N/A N/A 0.055±0.00 0.041±0.01 0.043±0.00 0.055±0.01 0.098±0.00
ENSMUSG00000081445 ENSMUST00000121008 N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A 0.110±0.00 N/A 0.016±0.00 N/A
ENSMUSG00000081662 ENSMUST00000119295 N/A N/A N/A N/A N/A N/A N/A N/A 0.154±0.00 N/A N/A 0.796±0.18 0.028±0.01 0.049±0.02
ENSMUSG00000084089 ENSMUST00000117769 N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A 0.409±0.17 N/A N/A
ENSMUSG00000084839 ENSMUST00000147868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.097±0.00 N/A N/A N/A

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