C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 216
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045078 Rnf216 10090 - 5:142990893-143113020 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053498 Rnf216-201 142990893-143113020 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053498
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053498 8.764±3.57 11.516±7.18 3.476±0.11 4.414±1.88 7.672±4.32 8.072±4.27 4.469±2.62 9.036±2.68 4.858±1.58 11.654±4.69 1.051±0.27 12.844±8.19 6.897±4.09 13.201±9.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000854 CIL_000854_0002 VISTA 5:142700569-143309825
CIL_00027J CIL_00027J_0003 CGP 5:142960343-143113020

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006915 IEA apoptotic process
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0032648 ISS regulation of interferon-beta production
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0050691 ISS regulation of defense response to virus by host
GO:0070936 ISS protein K48-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087893 rnf216 ring finger protein 216 protein_coding Danio_rerio
ENSG00000011275 RNF216 ring finger protein 216 protein_coding Homo_sapiens

Loading