C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 42
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102612 Ccdc42-003 ENSMUSG00000045915 10090 + 11:68594055-68597954 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaENSMUST00000102612
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000102612 0.044±0.00 0.111±0.02 0.051±0.00 0.239±0.13 0.067±0.02 0.153±0.04 0.041±0.04 3.708±0.84 0.583±0.40 2.384±3.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088C CIL_00088C_0002 VISTA 11:68323475-68924174
CIL_0009AZ CIL_0009AZ_0002 VISTA 11:68337699-68940744

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293845 CCDC42-001 protein_coding Homo_sapiens 0 536
ENST00000539522 CCDC42-002 protein_coding Homo_sapiens 0 279

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