C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polymerase (RNA) II (DNA directed) polypeptide K
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000045996 Polr2k 10090 + 15:36174010-36177010 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000057177 Polr2k-001 36174033-36177010 protein_coding
  ENSMUST00000180159 Polr2k-002 36174010-36177007 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057177ENSMUST00000180159
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057177 2.682±0.55 0.750±0.39 6.888±0.08 6.105±1.66 1.700±1.17 1.478±0.31 2.111±0.23 3.815±0.64 3.835±2.06 2.059±0.32 4.614±0.83 2.615±2.16 4.473±1.09 2.870±0.63
ENSMUST00000180159 1.912±0.66 0.639±0.02 37.365±1.39 22.389±16.28 1.305±0.51 0.960±0.50 5.157±1.56 3.153±1.92 26.642±27.86 1.711±1.08 29.247±3.32 25.125±21.53 22.946±11.72 4.965±1.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000O CIL_00000O_0002 CGP 15:36150060-36177010
CIL_000533 CIL_000533_0003 CGP 15:36174010-36235610

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001054 IBA RNA polymerase I activity
GO:0001055 IBA RNA polymerase II activity
GO:0001056 IBA RNA polymerase III activity
GO:0003677 IEA DNA binding
GO:0005634 ISS nucleus
GO:0005665 IBA:ISS DNA-directed RNA polymerase II, core complex
GO:0005666 IBA DNA-directed RNA polymerase III complex
GO:0005736 IBA DNA-directed RNA polymerase I complex
GO:0006360 IBA transcription from RNA polymerase I promoter
GO:0006366 IDA:ISS transcription from RNA polymerase II promoter
GO:0006383 IBA transcription from RNA polymerase III promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075616 polr2k polymerase (RNA) II (DNA directed) polypeptide K protein_coding Danio_rerio
ENSG00000147669 POLR2K polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa protein_coding Homo_sapiens

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