C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (RNA) II (DNA directed) polypeptide K
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000057177 Polr2k-001 ENSMUSG00000045996 10090 + 15:36174033-36177010 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000057177
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000057177 2.682±0.55 0.750±0.39 6.888±0.08 6.105±1.66 1.700±1.17 1.478±0.31 2.111±0.23 3.815±0.64 3.835±2.06 2.059±0.32 4.614±0.83 2.615±2.16 4.473±1.09 2.870±0.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000O CIL_00000O_0002 CGP 15:36150060-36177010
CIL_000533 CIL_000533_0003 CGP 15:36174010-36235610

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001054 IBA RNA polymerase I activity
GO:0001055 IBA RNA polymerase II activity
GO:0001056 IBA RNA polymerase III activity
GO:0003677 IEA DNA binding
GO:0005634 ISS nucleus
GO:0005665 IBA:ISS DNA-directed RNA polymerase II, core complex
GO:0005666 IBA DNA-directed RNA polymerase III complex
GO:0005736 IBA DNA-directed RNA polymerase I complex
GO:0006360 IBA transcription from RNA polymerase I promoter
GO:0006366 IDA:ISS transcription from RNA polymerase II promoter
GO:0006383 IBA transcription from RNA polymerase III promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000353107 POLR2K-001 protein_coding Homo_sapiens 0 279
ENST00000519765 POLR2K-003 processed_transcript Homo_sapiens 0 198
ENST00000522439 POLR2K-002 protein_coding Homo_sapiens 0 230

Loading