C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00000O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156509-ENSG00000147669 CGP 9606 8:100133360-100154002
GeneTranscriptPositionBiotype
ENSG00000147669 (POLR2K)
polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa 		ENST00000353107 (POLR2K-001) 100150584-100154002 protein_coding
ENST00000519765 (POLR2K-003) 100150625-100153646 processed_transcript
ENST00000522439 (POLR2K-002) 100150623-100152209 protein_coding
ENSG00000156509 (FBXO43)
F-box protein 43 		ENST00000428847 (FBXO43-001) 100133360-100145452 protein_coding
ENST00000517806 (FBXO43-003) 100133556-100145800 nonsense_mediated_decay
ENST00000520987 (FBXO43-002) 100136893-100145441 retained_intron
CIL_00000O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048230-ENSMUSG00000045996 CGP 10090 15:36150060-36177010
GeneTranscriptPositionBiotype
ENSMUSG00000045996 (Polr2k)
polymerase (RNA) II (DNA directed) polypeptide K 		ENSMUST00000057177 (Polr2k-001) 36174033-36177010 protein_coding
ENSMUST00000180159 (Polr2k-002) 36174010-36177007 protein_coding
ENSMUSG00000048230 (Fbxo43)
F-box protein 43 		ENSMUST00000058643 (Fbxo43-201) 36150060-36164884 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00000O_0001ENSG00000147669ENST00000353107ENST00000519765ENST00000522439ENSG00000156509ENST00000428847ENST00000517806ENST00000520987CIL_00000O_0002ENSMUSG00000045996ENSMUST00000057177ENSMUST00000180159ENSMUSG00000048230ENSMUST00000058643
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00000O_0001ENSG00000147669ENST00000353107ENST00000522439ENSG00000156509ENST00000428847ENST00000517806ENST00000520987CIL_00000O_0002ENSMUSG00000045996ENSMUST00000057177ENSMUST00000180159ENSMUSG00000048230ENSMUST00000058643
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147669 ENST00000353107 14.913±0.00 23.701±0.00 4.319±0.00 31.071±6.69 18.009±6.98 20.251±13.53 11.793±6.06 18.828±12.62 12.250±0.14 15.769±5.27 6.640±1.34 28.209±10.11 19.311±2.40 26.386±9.70
ENST00000519765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522439 N/A N/A N/A N/A 2.907±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000156509 ENST00000428847 N/A N/A N/A 0.021±0.00 N/A 0.068±0.00 N/A N/A 0.014±0.00 N/A N/A 0.203±0.00 N/A 2.489±2.21
ENST00000517806 N/A N/A N/A 0.015±0.00 N/A N/A N/A N/A N/A 0.174±0.00 N/A 0.052±0.00 0.084±0.04 5.216±3.69
ENST00000520987 0.041±0.00 0.143±0.00 0.103±0.00 0.087±0.00 0.081±0.00 0.099±0.00 0.008±0.00 0.027±0.01 0.011±0.00 0.107±0.00 0.029±0.01 0.109±0.06 0.061±0.04 0.445±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045996 ENSMUST00000057177 2.682±0.55 0.750±0.39 6.888±0.08 6.105±1.66 1.700±1.17 1.478±0.31 2.111±0.23 3.815±0.64 3.835±2.06 2.059±0.32 4.614±0.83 2.615±2.16 4.473±1.09 2.870±0.63
ENSMUST00000180159 1.912±0.66 0.639±0.02 37.365±1.39 22.389±16.28 1.305±0.51 0.960±0.50 5.157±1.56 3.153±1.92 26.642±27.86 1.711±1.08 29.247±3.32 25.125±21.53 22.946±11.72 4.965±1.60
ENSMUSG00000048230 ENSMUST00000058643 0.019±0.01 0.039±0.00 0.024±0.00 0.020±0.00 0.037±0.01 0.044±0.02 0.021±0.01 0.057±0.01 0.023±0.01 0.049±0.03 N/A 0.281±0.10 0.033±0.01 4.218±1.31

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