C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein O-fucosyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046020 Pofut1 10090 + 2:153241533-153270247 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049863 Pofut1-001 153241533-153270247 protein_coding
  ENSMUST00000099191 Pofut1-008 153241541-153265912 nonsense_mediated_decay
  ENSMUST00000099192 Pofut1-002 153241551-153261902 protein_coding
  ENSMUST00000109794 Pofut1-006 153241578-153266503 protein_coding
  ENSMUST00000123158 Pofut1-003 153241569-153250582 retained_intron
  ENSMUST00000123487 Pofut1-004 153257482-153267286 protein_coding
  ENSMUST00000152390 Pofut1-005 153257572-153268063 protein_coding
  ENSMUST00000170297 Pofut1-007 153241541-153265912 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049863ENSMUST00000099191ENSMUST00000099192ENSMUST00000123487ENSMUST00000152390ENSMUST00000170297
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049863 12.011±3.05 14.349±1.43 12.836±0.91 4.126±1.93 8.434±1.52 11.369±0.76 3.542±0.43 5.099±0.48 4.740±1.48 9.093±1.20 2.196±0.16 10.026±2.38 5.085±1.56 1.916±0.84
ENSMUST00000099191 16.742±1.05 N/A N/A N/A N/A N/A N/A N/A 2.792±0.00 N/A N/A N/A N/A 3.475±0.11
ENSMUST00000099192 N/A 12.345±2.74 N/A N/A 4.686±0.57 6.825±0.00 N/A N/A N/A N/A N/A 6.044±0.32 N/A N/A
ENSMUST00000123487 3.300±0.14 6.064±1.73 N/A N/A 2.412±0.63 3.001±0.00 N/A N/A N/A 1.781±0.15 N/A 3.991±1.11 N/A 0.952±0.06
ENSMUST00000152390 N/A N/A N/A 0.975±0.53 N/A N/A N/A N/A N/A N/A N/A 1.039±0.00 N/A N/A
ENSMUST00000170297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.514±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A4 CIL_0008A4_0002 VISTA 2:153181176-153785061
CIL_0006RY CIL_0006RY_0003 CGP 2:153227759-153270247
CIL_0006RX CIL_0006RX_0003 CGP 2:153241533-153333390

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IMP angiogenesis
GO:0001756 IMP somitogenesis
GO:0005783 IEA endoplasmic reticulum
GO:0006004 TAS fucose metabolic process
GO:0006493 ISS protein O-linked glycosylation
GO:0007219 IMP Notch signaling pathway
GO:0007399 IMP nervous system development
GO:0007507 IMP heart development
GO:0008417 ISS fucosyltransferase activity
GO:0016020 ISS membrane
GO:0036065 ISO fucosylation
GO:0036066 IEA protein O-linked fucosylation
GO:0046922 IEA peptide-O-fucosyltransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008953 pofut1 protein O-fucosyltransferase 1 protein_coding Danio_rerio
ENSG00000101346 POFUT1 protein O-fucosyltransferase 1 protein_coding Homo_sapiens

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