C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein O-fucosyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123487 Pofut1-004 ENSMUSG00000046020 10090 + 2:153257482-153267286 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLungOvaryTestisENSMUST00000123487
Transcript ID Adipose Adrenal Breast Colon Lung Ovary Testis
ENSMUST00000123487 3.300±0.14 6.064±1.73 2.412±0.63 3.001±0.00 1.781±0.15 3.991±1.11 0.952±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A4 CIL_0008A4_0002 VISTA 2:153181176-153785061
CIL_0006RY CIL_0006RY_0003 CGP 2:153227759-153270247
CIL_0006RX CIL_0006RX_0003 CGP 2:153241533-153333390

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IMP angiogenesis
GO:0001756 IMP somitogenesis
GO:0006004 TAS fucose metabolic process
GO:0007219 IMP Notch signaling pathway
GO:0007399 IMP nervous system development
GO:0007507 IMP heart development
GO:0008417 ISO fucosyltransferase activity
GO:0036065 ISO fucosylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375749 POFUT1-004 protein_coding Homo_sapiens 0 664
ENST00000465791 POFUT1-002 processed_transcript Homo_sapiens 0 444
ENST00000486717 POFUT1-001 processed_transcript Homo_sapiens 0 568

Loading