C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein O-fucosyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170297 Pofut1-007 ENSMUSG00000046020 10090 + 2:153241541-153265912 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000170297
Transcript ID Placenta
ENSMUST00000170297 3.514±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A4 CIL_0008A4_0002 VISTA 2:153181176-153785061
CIL_0006RY CIL_0006RY_0003 CGP 2:153227759-153270247
CIL_0006RX CIL_0006RX_0003 CGP 2:153241533-153333390

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IMP angiogenesis
GO:0001756 IMP somitogenesis
GO:0006004 TAS fucose metabolic process
GO:0007219 IMP Notch signaling pathway
GO:0007399 IMP nervous system development
GO:0007507 IMP heart development
GO:0008417 ISO fucosyltransferase activity
GO:0036065 ISO fucosylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375730 POFUT1-005 protein_coding Homo_sapiens 0 381
ENST00000375749 POFUT1-004 protein_coding Homo_sapiens 0 1061
ENST00000465791 POFUT1-002 processed_transcript Homo_sapiens 0 525
ENST00000486717 POFUT1-001 processed_transcript Homo_sapiens 0 1070

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