C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: poly(A) binding protein, cytoplasmic 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046173 Pabpc6 10090 - 17:9666497-9669704 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000057190 Pabpc6-201 9666497-9669704 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartKidneyLungOvaryTestisENSMUST00000057190
Transcript ID Adipose Brain Heart Kidney Lung Ovary Testis
ENSMUST00000057190 0.011±0.00 0.006±0.00 0.020±0.00 0.019±0.01 0.015±0.00 0.022±0.02 106.694±18.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008L7 CIL_0008L7_0002 VISTA 17:9586737-10190587

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0003723 IEA RNA binding
GO:0005575 ND cellular_component
GO:0008143 IEA poly(A) binding
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017219 pabpc1a poly A binding protein, cytoplasmic 1 a protein_coding Danio_rerio
ENSDARG00000021140 pabpc1b poly A binding protein, cytoplasmic 1 b protein_coding Danio_rerio
ENSG00000151846 PABPC3 poly(A) binding protein, cytoplasmic 3 protein_coding Homo_sapiens

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