C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: poly A binding protein, cytoplasmic 1 b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000021140 pabpc1b 7955 - 19:12744070-12767891 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000032474 pabpc1b-001 12744070-12767891 protein_coding
  ENSDART00000136324 pabpc1b-003 12756917-12760865 retained_intron
  ENSDART00000143087 pabpc1b-002 12754601-12767516 protein_coding
  ENSDART00000151056 pabpc1b-004 12756973-12767891 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000032474
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000032474 122.352±63.73 128.569±42.84 16.917±0.00 0.790±0.00 31.733±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000070756 PABPC1 poly(A) binding protein, cytoplasmic 1 protein_coding Homo_sapiens
ENSG00000151846 PABPC3 poly(A) binding protein, cytoplasmic 3 protein_coding Homo_sapiens
ENSMUSG00000022283 Pabpc1 poly(A) binding protein, cytoplasmic 1 protein_coding Mus_musculus
ENSMUSG00000046173 Pabpc6 poly(A) binding protein, cytoplasmic 6 protein_coding Mus_musculus
ENSMUSG00000051732 Pabpc2 poly(A) binding protein, cytoplasmic 2 protein_coding Mus_musculus

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