C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 39 (zinc transporter), member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046822 Slc39a3 10090 - 10:81028538-81037426 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000059551 Slc39a3-002 81028540-81037308 protein_coding
  ENSMUST00000117276 Slc39a3-001 81028538-81037426 protein_coding
  ENSMUST00000152177 Slc39a3-004 81033883-81037250 processed_transcript
  ENSMUST00000154877 Slc39a3-003 81033857-81037282 processed_transcript
  ENSMUST00000168076 Slc39a3-201 81028541-81033912 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059551ENSMUST00000117276ENSMUST00000168076
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059551 12.836±2.56 24.679±14.52 5.604±2.64 10.293±0.69 10.294±4.76 8.247±1.66 3.835±1.15 8.136±2.75 1.501±0.95 9.895±2.97 1.890±0.57 9.076±4.03 1.801±0.94 5.619±2.60
ENSMUST00000117276 5.027±1.40 15.237±4.28 3.784±0.37 15.697±1.76 2.612±0.94 8.596±1.34 1.512±0.63 4.481±2.01 2.265±1.09 6.955±1.26 2.520±1.42 8.772±3.31 1.870±0.13 8.328±4.25
ENSMUST00000168076 N/A 26.601±7.34 2.057±0.00 4.497±1.94 2.732±0.99 3.224±0.00 2.861±0.00 1.739±0.17 0.782±0.00 N/A 2.065±1.06 4.386±0.92 1.078±0.60 0.889±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RR CIL_0001RR_0002 CGP 10:81028538-81060178

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005385 IDA zinc ion transmembrane transporter activity
GO:0006829 IDA zinc ion transport
GO:0016021 IEA integral component of membrane
GO:0071577 IDA zinc ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000141873 SLC39A3 solute carrier family 39 (zinc transporter), member 3 protein_coding Homo_sapiens

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