C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 39 (zinc transporter), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059551 Slc39a3-002 ENSMUSG00000046822 10090 - 10:81028540-81037308 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059551
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059551 12.836±2.56 24.679±14.52 5.604±2.64 10.293±0.69 10.294±4.76 8.247±1.66 3.835±1.15 8.136±2.75 1.501±0.95 9.895±2.97 1.890±0.57 9.076±4.03 1.801±0.94 5.619±2.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RR CIL_0001RR_0002 CGP 10:81028538-81060178

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005385 IDA zinc ion transmembrane transporter activity
GO:0006829 IDA zinc ion transport
GO:0016021 IEA integral component of membrane
GO:0071577 IDA zinc ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269740 SLC39A3-002 protein_coding Homo_sapiens 0 787
ENST00000455372 SLC39A3-001 protein_coding Homo_sapiens 1.4013e-45 189
ENST00000545664 SLC39A3-003 protein_coding Homo_sapiens 0 778
ENST00000586572 AC006538.4-001 protein_coding Homo_sapiens 0 189
ENST00000589166 SLC39A3-006 protein_coding Homo_sapiens 0 287
ENST00000589363 SLC39A3-004 protein_coding Homo_sapiens 0 370

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